Tobacco mosaic virus (TMV) is one of the devastating plant viruses in the world that infects more than 200 plant species. Movement protein plays a supportive role in the movement of other plant viruses, and viral coat protein is highly expressed in infected plants and affects replication and movements of TMV. In order to investigate genetic variation in the terminal fragment sequence in Iranian...

with the aim of the secretion of human granulocyte macrophage-colony stimulating factor (hgm-csf) in escherichia coli, hgm-csf cdna was fused in-frame next to the signal sequence of st toxin (st-i) of exteroxigenic e. coli, containing 53 or 19 amino acids of signal peptide. the fused stsig::hgm-csf coding fragments were inserted into a t7-based expression plasmid. the recombinant plasmids were ...

With the aim of the secretion of human granulocyte macrophage-colony stimulating factor (hGM-CSF) in Escherichia coli, hGM-CSF cDNA was fused in-frame next to the signal sequence of ST toxin (ST-I) of exteroxigenic E. coli, containing 53 or 19 amino acids of signal peptide. The fused STsig::hGM-CSF coding fragments were inserted into a T7-based expression plasmid. The recombinant plasmids were ...

this paper considers the generation of some interpretable fuzzy rules for assigning an amino acid sequence into the appropriate protein superfamily. since the main objective of this classifier is the interpretability of rules, we have used the distribution of amino acids in the sequences of proteins as features. these features are the occurrence probabilities of six exchange groups in the seque...

The concept of a flexible protein sequence pattern is defined. In contrast to conventional pattern matching, template or sequence alignment methods, flexible patterns allow residue patterns typical of a complete protein fold to be developed in terms of residue positions (elements), separated by gaps of defined range. An efficient dynamic programming algorithm is presented to enable the best ali...