نتایج جستجو برای: rpob

تعداد نتایج: 1436  

Journal: :Journal of medical microbiology 2010
Chia-Sui Ong Yun-Fong Ngeow Sook-Fan Yap Sun-Tee Tay

In this study, PCR-RFLP analysis (PRA) targeting hsp65 and rpoB gene regions was evaluated for the identification of mycobacterial species isolated from Malaysian patients. Overall, the hsp65 PRA identified 92.2 % of 90 isolates compared to 85.6 % by the rpoB PRA. With 47 rapidly growing species, the hsp65 PRA identified fewer (89.4 %) species than the rpoB PRA (95.7 %), but with 23 slow-growin...

2014
Satish Kumar Lingaraja Jena

The disease tuberculosis, caused by Mycobacterium tuberculosis (MTB), remains a major cause of morbidity and mortality in developing countries. The evolution of drug-resistant tuberculosis causes a foremost threat to global health. Most drug-resistant MTB clinical strains are showing resistance to isoniazid and rifampicin (RIF), the frontline anti-tuberculosis drugs. Mutation in rpoB, the beta ...

Journal: :Journal of bacteriology 2009
Adelfia Talà Guojun Wang Martina Zemanova Susumu Okamoto Kozo Ochi Pietro Alifano

There is accumulating evidence that the ability of actinomycetes to produce antibiotics and other bioactive secondary metabolites has been underestimated due to the presence of cryptic gene clusters. The activation of dormant genes is therefore one of the most important areas of experimental research for the discovery of drugs in these organisms. The recent observation that several actinomycete...

Journal: :International journal of systematic and evolutionary microbiology 2004
Bozena Korczak Henrik Christensen Stefan Emler Joachim Frey Peter Kuhnert

Sequences of the gene encoding the beta-subunit of the RNA polymerase (rpoB) were used to delineate the phylogeny of the family Pasteurellaceae. A total of 72 strains, including the type strains of the major described species as well as selected field isolates, were included in the study. Selection of universal rpoB-derived primers for the family allowed straightforward amplification and sequen...

2012
Jun Li Jiaojiao Xin Liyuan Zhang Longyan Jiang Hongcui Cao Lanjuan Li

OBJECTIVE To establish a rapid detection method for identifying rpoB mutations associated with rifampin (RIF) resistance in sputum specimens. METHODS We detected rpoB mutations directly in 90 sputum specimens collected from suspected tuberculosis patients using PCR-based denaturing gradient gel electrophoresis (DGGE) and compared these results with those obtained by rpoB sequencing and conven...

Journal: :Journal of clinical microbiology 2003
Chang-Young Lim Keun-Hwa Lee Myung-Je Cho Myung-Woong Chang Seok-Yong Kim Na-Hye Myong Woo-Kon Lee Kwang-Ho Rhee Yoon-Hoh Kook

A novel PCR restriction analysis method using the RNA polymerase beta-subunit- coding gene (rpoB) was employed to both detect and identify Helicobacter pylori in biopsy specimens and culture isolates. The rpoB DNAs (458 bp) were specifically amplified by PCR with the Helicobacter-specific primers (HF and HR). Based on the determined rpoB sequences of the culture isolates, an H. pylori-specific ...

Journal: :Journal of clinical microbiology 2000
S H Lee B J Kim J H Kim K H Park S J Kim Y H Kook

We determined the nucleotide sequences (329 bp) of the rpoB DNAs from 22 reference strains of Borrelia. No insertions or deletions were observed. Deduced amino acid sequences of amplified rpoB DNA comprised 109 amino acid residues (N(450) to M(558) [Escherichia coli numbering]). All amino acid sequences were identical with the exception of those of Borrelia lusitaniae PotiB2 (T(461)-->A) and B....

2018
Victoria L. Campodónico Dalin Rifat Yu-Min Chuang Thomas R. Ioerger Petros C. Karakousis

Background:Mycobacterium tuberculosis (Mtb) rpoB mutations are associated with global metabolic remodeling. However, the net effects of rpoB mutations on Mtb physiology, metabolism and function are not completely understood. Based on previous work, we hypothesized that changes in the expression of cell wall molecules in Mtb mutant RpoB 526D lead to changes in cell wall permeability and to alter...

Journal: :Antimicrobial agents and chemotherapy 2015
Yu-Tze Horng Wen-Yih Jeng Yih-Yuan Chen Che-Hung Liu Horng-Yunn Dou Jen-Jyh Lee Kai-Chih Chang Chih-Ching Chien Po-Chi Soo

Most Mycobacterium tuberculosis rifampin-resistant strains have been associated with mutations in an 81-bp rifampin resistance-determining region (RRDR) in the gene rpoB. However, if this region alone were targeted, rifampin-resistant strains with mutations outside the RRDR would not be detected. In this study, among 51 rifampin-resistant clinical isolates analyzed by sequencing 1,681-bp-long D...

2016
Valeria D'Argenio Mauro Petrillo Daniela Pasanisi Caterina Pagliarulo Roberta Colicchio Adelfia Talà Maria Stella de Biase Mario Zanfardino Emanuela Scolamiero Chiara Pagliuca Antonio Gaballo Annunziata Gaetana Cicatiello Piergiuseppe Cantiello Irene Postiglione Barbara Naso Angelo Boccia Miriana Durante Luca Cozzuto Paola Salvatore Giovanni Paolella Francesco Salvatore Pietro Alifano

In contrast to the widely accepted consensus of the existence of a single RNA polymerase in bacteria, several actinomycetes have been recently shown to possess two forms of RNA polymerases due the to co-existence of two rpoB paralogs in their genome. However, the biological significance of the rpoB duplication is obscure. In this study we have determined the genome sequence of the lipoglycopept...

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