Salamander populations of the Plethodon jordani species complex form a challenging system for applying the general lineage concept of species to diagnose population-level lineages. The present study reports and analyses mitochondrial-DNA haplotypes ( ∼ 1200 nucleotide bases from the genes encoding ND2, tRNA Trp , and tRNA Ala from 438 salamanders) from 100 populations representing six species o...