The crystal structure of an 8-mer (S)-GNA duplex is presented. As a tool for phasing, the anomalous diffraction of two copper(II) ions within two artificial metallo-base pairs was employed. The duplex structure confirms a canonical Watson-Crick base pairing scheme of GNA with antiparallel strands. The duplex secondary structure is distinct from canonical A- and B-form nucleic acids and can be d...

High-resolution duplex sonography was compared with biplane magnified carotid angiography in a prospective evaluation of 161 carotid arteries in 86 patients. The duplex scanner combined real-time B-mode imaging (7.5 MHz) with simultaneous range-gated pulsed Doppler frequency analysis (3 MHz). The degree of stenosis was usually determined by the true and residual lumen of the carotid artery at t...

We compared ultrasonic duplex scanning and angiography for the localization and classification of arterial stenoses and occlusions in 32 patients. The criteria for the detection of a greater than 50% diameter reducing stenosis was an increase in peak systolic velocity of greater than 100%, loss of reverse flow, and spectral broadening. Duplex studies and angiograms were evaluated in a blinded f...

Model-building studies were carried out on the trimer AUA. Bulge-out structures which allow incorporation into a continuous RNA helix were generated and energy-minimized. All geometrical features obtained by previous NMR studies on purine-pyrimidine-purine sequences are accounted for in these models. One of the models was used to fit into a double helical fragment. Only minor changes were neces...

Noncovalent interactions between aromatic nucleobases are the major stabilizing forces which contribute to the structural integrity of duplex DNA and RNA.1-3 However, base pairing in nucleic acids is a consequence of more than just hydrogen bonding alone. The predictive success of nearest neighbor analysis,4 along with “dangling base” measurements which show duplex stabilization in the absence ...

OBJECTIVE The aim of this study was to investigate a possible overestimation of the degree of contralateral carotid artery stenosis by duplex in patients with significant bilateral carotid stenoses who are to undergo carotid endarterectomy (CEA). METHODS A retrospective analysis was performed of all patients undergoing CEA in our center over a period of 11 years. Pre- and postoperative duplex...

HYPOTHESIS Incidental thyroid masses identified during carotid duplex ultrasonography may represent clinically significant lesions. DESIGN AND SETTING Retrospective review of a prospective database in a tertiary care referral center. PATIENTS A total of 2004 consecutive patients from January, 2000, through January, 2002, undergoing carotid duplex ultrasonography. INTERVENTIONS After bilat...

The effect of the single, site-specific interstrand cross-link formed by cisplatin or transplatin on the thermal stability and energetics of a 20-base pair DNA duplex is reported. The cross-linked or unplatinated 20-base pair duplexes were investigated with the aid of differential scanning calorimetry, temperature-dependent UV absorption, and circular dichroism. The cross-link of both platinum ...

As a first step in DNA strand exchange, recA protein forms a filamentous complex on single-stranded DNA (ssDNA), which contains stoichiometric (one recA monomer per four nucleotides) amounts of recA protein. recA protein monomers within this complex hydrolyze ATP with a turnover number of 25 min-1. Upon introduction of linear homologous duplex DNA to initiate strand exchange, this rate of ATP h...

The duplex-forming activities of oligonucleotides can be photomodulated by incorporation of an azobenzene unit. Upon isomerizing the trans-azobenzene to the cis form by irradiation with UV light, the T(m) value of the duplex (with the complementary DNA) is lowered so that the duplex is dissociated. The duplex is formed again when the cis-azobenzene is converted to the trans-azobenzene by irradi...