نتایج جستجو برای: phenotypic assays

تعداد نتایج: 173924  

2015
Maria Teresa Lara Ortiz Pablo Benjamín Leon Rosario Pablo Luna-Nevarez Alba Savin Gamez Ana Martínez-del Campo Gabriel Del Rio

Relating a gene mutation to a phenotype is a common task in different disciplines such as protein biochemistry. In this endeavour, it is common to find false relationships arising from mutations introduced by cells that may be depurated using a phenotypic assay; yet, such phenotypic assays may introduce additional false relationships arising from experimental errors. Here we introduce the use o...

2015
Mattias Karlsson

Chronic pain is a disease area with a significant and unmet need for improved treatments. However, due to the complex nature of pain transduction, pain is a notoriously difficult area for drug discovery, where conventional target-based efforts have largely failed to produce new drugs. In this whitepaper, we present a novel phenotypic screening platform based on our proprietary Cellaxess® Elektr...

2018
Marianne Ellegaard Anna Godhe Sofia Ribeiro

Undisturbed records of resting stages produced in the past and stored in coastal sediments are very valuable to science, because they may provide unique insights into past evolutionary and ecological trajectories. Within marine phytoplankton, multidecadal time series of monoclonal strains germinated from resting stages have been established for diatoms (Skeletonema marinoi) and dinoflagellates ...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2016
Eli Rodgers-Melnick Daniel L Vera Hank W Bass Edward S Buckler

Cellular processes mediated through nuclear DNA must contend with chromatin. Chromatin structural assays can efficiently integrate information across diverse regulatory elements, revealing the functional noncoding genome. In this study, we use a differential nuclease sensitivity assay based on micrococcal nuclease (MNase) digestion to discover open chromatin regions in the maize genome. We find...

Journal: :Journal of clinical microbiology 2012
Anna Engström Nora Morcillo Belen Imperiale Sven E Hoffner Pontus Juréen

Conventional phenotypic drug susceptibility testing (DST) methods for Mycobacterium tuberculosis are laborious and very time-consuming. Early detection of drug-resistant tuberculosis (TB) is essential for prevention and control of TB transmission. We have developed a pyrosequencing method for simultaneous detection of mutations associated with resistance to rifampin, isoniazid, ethambutol, amik...

Journal: :Journal of experimental botany 2006
K Roberts A H Shirsat

Extensins are hydroxyproline-rich glycoproteins which are abundant in the cell walls of higher plants and whose precise function has been the subject of much speculation. In order to investigate this, transgenic A. thaliana plants were generated containing the Arabidopsis Atext1 extensin coding sequence under the transcriptional control of the strong constitutive CaMV 35S promoter. Northern ana...

Journal: :Annals of the New York Academy of Sciences 2015
Elna van der Ryst Jayvant Heera James Demarest Charles Knirsch

Assays to identify infectious organisms are critical for diagnosis and enabling the development of therapeutic agents. The demonstration that individuals with a 32-bp deletion within the CCR5 locus were resistant to human immunodeficiency virus (HIV) infection, while those heterozygous for the mutation progressed more slowly, led to the discovery of maraviroc (MVC), a CCR5 antagonist. As MVC is...

Journal: :Journal of virology 2003
J Gerardo García-Lerma Hamish MacInnes Diane Bennett Patrick Reid Soumya Nidtha Hillard Weinstock Jonathan E Kaplan Walid Heneine

Stavudine (d4T) and zidovudine (AZT) are thymidine analogs widely used in the treatment of human immunodeficiency virus type 1 (HIV-1)-infected persons. Resistance to d4T is not fully understood, although the selection of AZT resistance mutations in patients treated with d4T suggests that both drugs have similar pathways of resistance. Through the analysis of genotypic changes in nine recombina...

2016
Kyung-Tae Lee Yee-Seul So Dong-Hoon Yang Kwang-Woo Jung Jaeyoung Choi Dong-Gi Lee Hyojeong Kwon Juyeong Jang Li Li Wang Soohyun Cha Gena Lee Meyers Eunji Jeong Jae-Hyung Jin Yeonseon Lee Joohyeon Hong Soohyun Bang Je-Hyun Ji Goun Park Hyo-Jeong Byun Sung Woo Park Young-Min Park Gloria Adedoyin Taeyup Kim Anna F Averette Jong-Soon Choi Joseph Heitman Eunji Cheong Yong-Hwan Lee Yong-Sun Bahn

Cryptococcus neoformans is the leading cause of death by fungal meningoencephalitis; however, treatment options remain limited. Here we report the construction of 264 signature-tagged gene-deletion strains for 129 putative kinases, and examine their phenotypic traits under 30 distinct in vitro growth conditions and in two different hosts (insect larvae and mice). Clustering analysis of in vitro...

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