The evolution of locally adapted ecotypes is a common phenomenon that generates diversity within plant species. However, we know surprisingly little about the genetic mechanisms underlying the locally adapted traits involved in ecotype formation. The genetic architecture underlying locally adapted traits dictates how an organism will respond to environmental selection pressures and has major im...

the construction of molecular maps and identification of genomic regions controlling quantitative traits have great significance for plant breeders. in this study, a genetic analysis of quantitative trait loci (qtls) affecting the heading date of rice was performed using an f2 population of a cross between two iranian landrace cultivars, domsephid and gerdeh, comprising 192 plants. an approxima...

Cryptococcus neoformans is a fungal human pathogen with a bipolar mating system. It undergoes a dimorphic transition from a unicellular yeast to hyphal filamentous growth during mating and monokaryotic fruiting. The traditional sexual cycle that leads to the production of infectious basidiospores involves cells of both alpha and a mating type. Monokaryotic fruiting is a modified form of sexual ...

Rice (Oryza sativa) is sensitive to salinity, which affects one-fifth of irrigated land worldwide. Reducing sodium and chloride uptake into rice while maintaining potassium uptake are characteristics that would aid growth under saline conditions. We describe genetic determinants of the net quantity of ions transported to the shoot, clearly distinguishing between quantitative trait loci (QTL) fo...

Epistasis, i.e., the fact that gene effects depend on the genetic background, is a direct consequence of the complexity of genetic architectures. Despite this, most of the models used in evolutionary and quantitative genetics pay scant attention to genetic interactions. For instance, the traditional decomposition of genetic effects models epistasis as noise around the evolutionarily-relevant ad...

Mendelian loci that control the expression levels of transcripts are called expression quantitative trait loci (eQTL). When mapping eQTL, we often deal with thousands of expression traits simultaneously, which complicates the statistical model and data analysis. Two simple approaches may be taken in eQTL analysis: (1) individual transcript analysis in which a single expression trait is mapped a...

This paper briefly examines current methodology for developing genetic linkage maps and using them to find loci for quantitative traits (QTL). Maximum likelihood interval mapping is viewed as an extension of classical least squares methods when the trait of interest is normally distributed and located near a genetic marker. Some problems in finding multiple loci for a quantitative trait are exa...

Chicken genomics has benefited from the rapid technological advances in the genomics of model organisms and man. A number of resources and approaches are now well established, in the chicken, including genetic markers and maps (both genetic and physical), quantitative trait loci mapping, comparative mapping, expressed sequence tag and bacterial artificial chromosome resources, and physical mapp...

Several quantitative trait loci (QTL) mapping strategies can successfully identify major-effect loci, but often have poor success detecting loci with minor effects, potentially due to the confounding effects of major loci, epistasis, and limited sample sizes. To overcome such difficulties, we used a targeted backcross mapping strategy that genetically eliminated the effect of a previously ident...

t4 and t3, two major hormones of thyroid gland, are responsible for regulation of “basal metabolism” in the body. thyroid function is regulated primarily by variation in the pituitary tsh. in this study, about four hundred individuals were considered from four iranian populations. they were selected randomly in their cities; shiraz, mashhad, rasht, and ilam. essential family information was ask...