in this paper we focus on the tracking performance of incremental adaptive LMS algorithm in an adaptive network. For this reason we consider the unknown weight vector to be a time varying sequence. First we analyze the performance of network in tracking a time varying weight vector and then we explain the estimation of Rayleigh fading channel through a random walk model. Closed form relations a...

This paper considers the single machine scheduling problem with precedence constraints and deteriorating jobs. A mathematical model based on binary integer programming (BIP) is developed. By these precedence constraints, jobs can not start before completion of its all predecessors. The represented model is in two steps, in step one the earliest starting time of each job is computed, then the re...

This paper considers a three-stage assembly flowshop scheduling problem with sequence-dependent setup < /div> times at the first stage and blocking times between each stage in such a way that the weighted mean completion time and makespan are minimized. Obtaining an optimal solution for this type of complex, large-sized problem in reasonable computational time using traditiona...

Multiple sequence alignment (MSA) has been one of the most important problems in bioinformatics for more decades and it is still heavily examined by many mathematicians and biologists. However, mostly because of the practical motivation of this problem, the research on this topic is focused on aligning long sequences. It is understandable, since the sequences that need to be aligned (usually DN...

Accurately aligning distant protein sequences is notoriously difficult. A recent approach to improving alignment accuracy is to use additional information such as predicted secondary structure. We introduce several new models for scoring alignments of protein sequences with predicted secondary structure, which use the predictions and their confidences to modify both the substitution and gap cos...

One-Block CYRCA is an automated procedure for identifying multiple-block alignments from single block queries (http://bioinfo.weizmann.ac.il/blocks/OneCYRCA). It is based on the LAMA and CYRCA block-to-block alignment methods. The procedure identifies whether the query blocks can form new multiple-block alignments (block sets) with blocks from a database or join pre-existing database block sets...

We present a bi-objective model for a green truck scheduling and routing problem at a cross-docking system. This model determines three key decisions at the cross dock: (1) defining a sequence and schedule of inbound trucks at the receiving door, (2) specifying a sequence and a schedule of outbound trucks at the shipping door, and (3) determining the routes of the outbound truck while serving c...

In this paper, a genetic algorithm is presented for an identical parallel-machine scheduling problem with family setup time that minimizes the total weighted flow time ( ). No set-up is necessary between jobs belonging to the same family. A set-up must be scheduled when switching from the processing of family i jobs to those of another family j, i  j, the duration of this set-up being the sequ...