نتایج جستجو برای: 962 snps average observed heterozygosity

تعداد نتایج: 1241553  

The present study evaluates the biosynthesis of silver nanoparticles (SNPs) mediated by xerophytic plants, Cynanchum viminale and Cynanchum sarcomedium. The reaction between plant extracts and silver nitrate solution resulted in a yellowish brown/dark brown colored solution which suggests the formation of SNPs. Physical characteristics of synthesized SNPs were determined using...

Journal: :Conservation Genetics Resources 2021

Neotrypaea japonica (Ortmann 1891) is a burrowing shrimp that lives in tidal flats. In this study, 123 SNP markers were isolated and characterized from N. japonica. The frequency range of minor alleles varied 0.2500 to 0.4833, the observed heterozygosity ranged 0.4333 0.9000, expected 0.4944 0.6503. polymorphic parameter inbreeding value 0.3680 0.5651 ? 0.2768 0.1045, respectively. Significant ...

Journal: :Genes 2023

On a planet experiencing constant human population growth, it is necessary to explore the anthropogenic effects on genetic diversity of species, and specifically invasive species. Using an analysis that integrates comparative phylogeography, urban landscape genetics, macrogenetics systematic review, we worldwide commensal species Rattus rattus norvegicus. Based metadata obtained considering 35 ...

Journal: :Neoplasia 2015
Sara J Felts Virginia P Van Keulen Michael J Hansen Michael P Bell Kathleen Allen Alem A Belachew Richard G Vile Julie M Cunningham Tanya L Hoskin V Shane Pankratz Larry R Pease

Breast tumors in (FVB × BALB-NeuT) F1 mice have characteristic loss of chromosome 4 and sporadic loss or gain of other chromosomes. We employed the Illumina GoldenGate genotyping platform to quantitate loss of heterozygosity (LOH) across the genome of primary tumors, revealing strong biases favoring chromosome 4 alleles from the FVB parent. While allelic bias was not observed on other chromosom...

2014
Yi-Liang Wei Cui-Jiao Qin Hai-Bo Liu Jing Jia Lan Hu Cai-Xia Li

AIM To genotype and evaluate a panel of single-nucleotide polymorphisms for individual identification (IISNPs) in three Chinese populations: Chinese Han, Uyghur, and Tibetan. METHODS Two previously identified panels of IISNPs, 86 unlinked IISNPs and SNPforID 52-plex markers, were pooled and analyzed. Four SNPs were included in both panels. In total, 132 SNPs were typed on Sequenom MassARRAY® ...

2011
Conghui Qu Johanna M. Schuetz Jeong Eun Min Stephen Leach Denise Daley John J. Spinelli Angela Brooks-Wilson Jinko Graham

We describe a statistical approach to predict gender-labeling errors in candidate-gene association studies, when Y-chromosome markers have not been included in the genotyping set. The approach adds value to methods that consider only the heterozygosity of X-chromosome SNPs, by incorporating available information about the intensity of X-chromosome SNPs in candidate genes relative to autosomal S...

E. Zareian Jahromi, I. Ahrari M. Ghavipisheh M. Ranjbari S. Ahrari S. Khaleghizadeh

Calpastatin (CAST) is a specific inhibiter of Calpains, playing a role in meat tenderization and myogenesis. In the present study the polymorphism of the CAST gene ofKhalkhali goat in Azerbaijan province in Iran was investigated by polymerase chain reaction and restriction fragment length polymorphism technique (PCR-RFLP). Genomic DNA was extracted from whole blood samples collected from 200 Kh...

The main objective of this study was to assess genetic comparison of two migratory forms of Caspian trout Salmo trutta caspius namely fall-run and spring-run. Owing to the lack of information on its genetic differences, 5 microsatellite loci were used for 58 sample analyses. Genomic DNA was extracted from caudal fin using Roche DNA extraction kit and each PCR reaction was performed in a 25 ?l ...

Journal: :Genetic Resources and Crop Evolution 2022

Abstract The Uganda National GeneBank is a key reservoir of genetic diversity for sorghum ( Sorghum bicolor (L.) Moench), with over 3333 accessions which are predominantly landraces (96.48%), but also includes the weedy (0.63%), breeding lines (2.5%) and released varieties (0.39%). This resource from primary center domestication important broadening elite cultivars through breeding. However, du...

Journal: :Japanese journal of human genetics 1989

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