نتایج جستجو برای: b1 phylotype

تعداد نتایج: 20237  

2016
Chengwu Zou Kaihao Wang Jiaorong Meng Gaoqing Yuan Wei Lin Haowen Peng Qiqin Li

Ralstonia solanacearumstrain Rs-T02 was originally isolated from a bacterial wilt of tomato plant in Nanning City of Guangxi Province, China. It represents the most prevalent phylotype in Guangxi. Here, we present the draft genome sequence of this strain, which comprises 5,225 genes and 5,976,011 nucleotides with an average G+C content of 66.79%. There are 968 different genes between this isola...

Journal: :Applied and environmental microbiology 2007
Sonja K Fagervold Harold D May Kevin R Sowers

The specific dechlorination pathways for Aroclor 1260 were determined in Baltimore Harbor sediment microcosms developed with the 11 most predominant congeners from this commercial mixture and their resulting dechlorination intermediates. Most of the polychlorinated biphenyl (PCB) congeners were dechlorinated in the meta position, and the major products were tetrachlorobiphenyls with unflanked c...

2011
Benoît Remenant Jean-Charles de Cambiaire Gilles Cellier Jonathan M. Jacobs Sophie Mangenot Valérie Barbe Aurélie Lajus David Vallenet Claudine Medigue Mark Fegan Caitilyn Allen Philippe Prior

The Ralstonia solanacearum species complex includes R. solanacearum, R. syzygii, and the Blood Disease Bacterium (BDB). All colonize plant xylem vessels and cause wilt diseases, but with significant biological differences. R. solanacearum is a soilborne bacterium that infects the roots of a broad range of plants. R. syzygii causes Sumatra disease of clove trees and is actively transmitted by ce...

2016
Santatra Ravelomanantsoa Isabelle Robène Frédéric Chiroleu Fabien Guérin Stéphane Poussier Olivier Pruvost Philippe Prior

Background. Reliable genotyping that provides an accurate description of diversity in the context of pathogen emergence is required for the establishment of strategies to improve disease management. MultiLocus variable number tandem repeat analysis (MLVA) is a valuable genotyping method. It can be performed at small evolutionary scales where high discriminatory power is needed. Strains of the R...

Journal: :The Biological bulletin 2007
Robert C Vrijenhoek Melissa Duhaime William J Jones

Symbiosis involving chemoautotrophic bacteria allows vestimentiferan tubeworms to thrive in sulfidic marine environments. This study examined genetic variation among endosymbionts associated with three vestimentiferan species from the Gulf of California. Small subunit (16S) rRNA sequences identified two evolutionary lineages of -Proteobacteria in these worms. Phylotype-II bacteria associated wi...

2017
Noura Yahiaoui Jean-Jacques Chéron Santatra Ravelomanantsoa Azali A. Hamza Bobb Petrousse Rajan Jeetah Yasmina Jaufeerally-Fakim Jérôme Félicité Jacques Fillâtre Bruno Hostachy Fabien Guérin Gilles Cellier Philippe Prior Stéphane Poussier

Epidemiological surveillance of plant pathogens based on genotyping methods is mandatory to improve disease management strategies. In the Southwest Indian Ocean (SWIO) islands, bacterial wilt (BW) caused by the Ralstonia solanacearum species complex (RSSC) is hampering the production of many sustainable and cash crops. To thoroughly analyze the genetic diversity of the RSSC in the SWIO, we perf...

Journal: :Applied and environmental microbiology 2006
Yuki Kasai Yoh Takahata Mike Manefield Kazuya Watanabe

Stable isotope probing (SIP) of benzene-degrading bacteria in gasoline-contaminated groundwater was coupled to denaturing gradient gel electrophoresis (DGGE) of DNA fragments amplified by reverse transcription-PCR from community 16S rRNA molecules. Supplementation of the groundwater with [(13)C(6)]benzene together with an electron acceptor (nitrate, sulfate, or oxygen) showed that a phylotype a...

2010
Anna Lyra Lotta Krogius-Kurikka Janne Nikkilä Erja Malinen Kajsa Kajander Kyösti Kurikka Riitta Korpela Airi Palva

BACKGROUND Probiotics can alleviate the symptoms of irritable bowel syndrome (IBS), possibly by stabilizing the intestinal microbiota. Our aim was to determine whether IBS-associated bacterial alterations were reduced during multispecies probiotic intervention consisting of Lactobacillus rhamnosus GG, L. rhamnosus Lc705, Propionibacterium freudenreichii ssp. shermanii JS and Bifidobacterium bre...

2015
Ulrike Jaekel Johannes Zedelius Heinz Wilkes Florin Musat

The fate of cyclohexane, often used as a model compound for the biodegradation of cyclic alkanes due to its abundance in crude oils, in anoxic marine sediments has been poorly investigated. In the present study, we obtained an enrichment culture of cyclohexane-degrading sulfate-reducing bacteria from hydrocarbon-contaminated intertidal marine sediments. Microscopic analyses showed an apparent d...

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