نتایج جستجو برای: deinococcus radiodurans

تعداد نتایج: 1046  

Journal: :Applied and environmental microbiology 2000
R Meima M E Lidstrom

The nucleotide sequence of a 12-kb fragment of the cryptic Deinococcus radiodurans SARK plasmid pUE10 was determined, in order to direct the development of small, versatile cloning systems for Deinococcus. Annotation of the sequence revealed 12 possible open reading frames. Among these are the repU and resU genes, the predicted products of which share similarity with replication proteins and si...

Journal: :PLoS Genetics 2009
Arjan de Groot Rémi Dulermo Philippe Ortet Laurence Blanchard Philippe Guérin Bernard Fernandez Benoit Vacherie Carole Dossat Edmond Jolivet Patricia Siguier Michael Chandler Mohamed Barakat Alain Dedieu Valérie Barbe Thierry Heulin Suzanne Sommer Wafa Achouak Jean Armengaud

To better understand adaptation to harsh conditions encountered in hot arid deserts, we report the first complete genome sequence and proteome analysis of a bacterium, Deinococcus deserti VCD115, isolated from Sahara surface sand. Its genome consists of a 2.8-Mb chromosome and three large plasmids of 324 kb, 314 kb, and 396 kb. Accurate primary genome annotation of its 3,455 genes was guided by...

Journal: :Acta biochimica Polonica 2007
Paweł Filipkowski Józef Kur

To study the biochemical properties of SSB's from Deinococcus grandis (DgrSSB) and Deinococcus proteolyticus (DprSSB), we have cloned the ssb genes obtained by PCR and have developed Escherichia coli overexpression systems. The genes consist of an open reading frame of 891 (DgrSSB) and 876 (DprSSB) nucleotides encoding proteins of 296 and 291 amino acids with a calculated molecular mass of 32.2...

Journal: :Journal of bacteriology 2001
R Meima H M Rothfuss L Gewin M E Lidstrom

Deinococcus radiodurans is a highly radiation-resistant bacterium that is classed in a major subbranch of the bacterial domain. Since very little is known about gene expression in this bacterium, an initial study of promoters was undertaken. In order to isolate promoters and study promoter function, a series of integrative vectors for stable chromosomal insertion in D. radiodurans were develope...

Journal: :DNA repair 2010
Vidya A Kamble Hari S Misra

Deinococcus radiodurans lacks a homologue of the recB and recC genes, and the sbcA/B genes, of Escherichia coli. Thus, DNA strand break repair in Deinococcus proceeds by pathways that do not utilize these proteins. Unlike E. coli, the absence of recBC and sbcA/sbcB, and presence of only sbcC and sbcD in Deinococcus, indicates an enigmatic role of SbcCD in this bacterium. Studies on sbcCD mutati...

Journal: :Molecular biology and evolution 2015
Hongan Long Sibel Kucukyildirim Way Sung Emily Williams Heewook Lee Matthew Ackerman Thomas G Doak Haixu Tang Michael Lynch

Deinococcus bacteria are extremely resistant to radiation, oxidation, and desiccation. Resilience to these factors has been suggested to be due to enhanced damage prevention and repair mechanisms, as well as highly efficient antioxidant protection systems. Here, using mutation-accumulation experiments, we find that the GC-rich Deinococcus radiodurans has an overall background genomic mutation r...

2015
Matthew E. Lopper Jacob Boone Christopher Morrow Sergey Korolev

Reactivation of repaired DNA replication forks in bacteria is catalyzed by PriA helicase. This broadly-conserved bacterial enzyme can remodel the structure of DNA at a repaired DNA replication fork by unwinding small portions of duplex DNA to prepare the fork for replisome reloading. While PriA's helicase activity is not strictly required for cell viability in E. coli, the sequence motifs that ...

2015
Yunguang Wang Qiang Xu Huiming Lu Lin Lin Liangyan Wang Hong Xu Xianyan Cui Hui Zhang Tingting Li Yuejin Hua

The extremophilic bacterium Deinococcus radiodurans exhibits an extraordinary resistance to ionizing radiation. Previous studies established that a protein named PprI, which exists only in the Deinococcus-Thermus family, acts as a general switch to orchestrate the expression of a number of DNA damage response (DDR) proteins involved in cellular radio-resistance. Here we show that the regulatory...

2006
Swathi Kota Hari S. Misra

Deinococcus radiodurans is characterized by its exceptional capacity to tolerate the effects of various DNA damaging agents due to presence of the extraordinary DNA repair mechanism. DNA double strand break repair in Deinococcus radiodurans follows biphasic kinetics. The phase I, a RecA independent phase appears to be a DNA protective and preparatory phase for RecA dependent phase II repair. Pp...

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