We performed molecular dynamics simulations of the genome packaging of bacteriophage P4 using two coarse-grained models of DNA. The first model, 1DNA6 (one pseudo-atom per six DNA basepairs), represents DNA as a string of beads, for which DNA torsions are undefined. The second model, 3DNA6 (three pseudo-atoms per six DNA basepairs), represents DNA as a series of base planes with torsions define...

The symmetries of the DNA double helix require a new term in its linear response to stress: the coupling between twist and stretch. Recent experiments with torsionally-constrained single molecules give the first direct measurement of this important material parameter. We extract its value from a recent experiment of Strick, et al. and find rough agreement with an independent experimental estima...

Covert-feathers-inspired passive flow control is beneficial for aerodynamic performance at post-stall angles of attack. However, most studies model covert feathers as a rigidly attached or freely moving flap on wing. The mounted via torsional spring, emblematic to the finite stiffness bird feathers, has remained unexplored. We simulate strongly coupled fluid-structure interactions past stationa...