نتایج جستجو برای: ژن rpob

تعداد نتایج: 17183  

Journal: :Journal of clinical microbiology 2003
Chang-Young Lim Keun-Hwa Lee Myung-Je Cho Myung-Woong Chang Seok-Yong Kim Na-Hye Myong Woo-Kon Lee Kwang-Ho Rhee Yoon-Hoh Kook

A novel PCR restriction analysis method using the RNA polymerase beta-subunit- coding gene (rpoB) was employed to both detect and identify Helicobacter pylori in biopsy specimens and culture isolates. The rpoB DNAs (458 bp) were specifically amplified by PCR with the Helicobacter-specific primers (HF and HR). Based on the determined rpoB sequences of the culture isolates, an H. pylori-specific ...

Journal: :Journal of clinical microbiology 2000
S H Lee B J Kim J H Kim K H Park S J Kim Y H Kook

We determined the nucleotide sequences (329 bp) of the rpoB DNAs from 22 reference strains of Borrelia. No insertions or deletions were observed. Deduced amino acid sequences of amplified rpoB DNA comprised 109 amino acid residues (N(450) to M(558) [Escherichia coli numbering]). All amino acid sequences were identical with the exception of those of Borrelia lusitaniae PotiB2 (T(461)-->A) and B....

2018
Victoria L. Campodónico Dalin Rifat Yu-Min Chuang Thomas R. Ioerger Petros C. Karakousis

Background:Mycobacterium tuberculosis (Mtb) rpoB mutations are associated with global metabolic remodeling. However, the net effects of rpoB mutations on Mtb physiology, metabolism and function are not completely understood. Based on previous work, we hypothesized that changes in the expression of cell wall molecules in Mtb mutant RpoB 526D lead to changes in cell wall permeability and to alter...

Journal: :Antimicrobial agents and chemotherapy 2015
Yu-Tze Horng Wen-Yih Jeng Yih-Yuan Chen Che-Hung Liu Horng-Yunn Dou Jen-Jyh Lee Kai-Chih Chang Chih-Ching Chien Po-Chi Soo

Most Mycobacterium tuberculosis rifampin-resistant strains have been associated with mutations in an 81-bp rifampin resistance-determining region (RRDR) in the gene rpoB. However, if this region alone were targeted, rifampin-resistant strains with mutations outside the RRDR would not be detected. In this study, among 51 rifampin-resistant clinical isolates analyzed by sequencing 1,681-bp-long D...

2016
Valeria D'Argenio Mauro Petrillo Daniela Pasanisi Caterina Pagliarulo Roberta Colicchio Adelfia Talà Maria Stella de Biase Mario Zanfardino Emanuela Scolamiero Chiara Pagliuca Antonio Gaballo Annunziata Gaetana Cicatiello Piergiuseppe Cantiello Irene Postiglione Barbara Naso Angelo Boccia Miriana Durante Luca Cozzuto Paola Salvatore Giovanni Paolella Francesco Salvatore Pietro Alifano

In contrast to the widely accepted consensus of the existence of a single RNA polymerase in bacteria, several actinomycetes have been recently shown to possess two forms of RNA polymerases due the to co-existence of two rpoB paralogs in their genome. However, the biological significance of the rpoB duplication is obscure. In this study we have determined the genome sequence of the lipoglycopept...

Journal: :The Southeast Asian journal of tropical medicine and public health 2000
P Ramasoota W Wongwit P Sampunachot K Unnarat M Ngamying S B Svenson

A new finding is reported of multiple mutations in the rpoB gene of 9 Mycobacterium leprae strains from leprosy patients in Thailand, who did not respond to therapy even when rifampicin, the main drug in multi-drug therapy was used. By means of sequence analysis of 9 Thai M. leprae strains, various mutations in 289 bps of the rpoB gene revealed forms of mutation never before described, such as ...

2017
Risara Jaksuwan Prasit Tharavichikul Jayanton Patumanond Charoen Chuchottaworn Sakarin Chanwong Saijai Smithtikarn Jongkolnee Settakorn

BACKGROUND Multidrug/extensively drug-resistant tuberculosis (M/XDR-TB) is a major public health problem, and early detection is important for preventing its spread. This study aimed to demonstrate the distribution of genetic site mutation associated with drug resistance in M/XDR-TB in the northern Thai population. METHODS Thirty-four clinical MTB isolates from M/XDR-TB patients in the upper ...

Journal: :jundishapur journal of microbiology 0
leyla sahebi phd of molecular epidemiology, tuberculosis and lung disease research center, tabriz university of medical sciences, tabriz, ir iran khalil ansarin phd of molecular epidemiology, tuberculosis and lung disease research center, tabriz university of medical sciences, tabriz, ir iran; tuberculosis and lung disease research center, tabriz university of medical sciences, tabriz, ir iran. tel/fax: +98-04113378093 amir monfaredan department of hematology, faculty of medicine, tabriz branch, islamic azad university, tabriz, ir iran safar farajnia drug applied research center, tabriz university of medical sciences, tabriz, ir iran seiran nili phd student of epidemiology, health deputy, kurdistan university of medical sciences, sanandaj, ir iran majid khalili medical philosophy and history research center, tabriz university of medical sciences, tabriz, ir iran

conclusions detection of drug resistance associated with mutations through real-time pcr by melting analysis technique showed a high differentiating power. this technique had high concordance with the standard proportion test and mas-pcr results. patients and methods in a cross-sectional study carried out in 2014, 90 patients with m. tuberculosis from five border provinces of iran were selected...

Journal: :Antimicrobial agents and chemotherapy 1998
D L Williams L Spring L Collins L P Miller L B Heifets P R Gangadharam T P Gillis

The contributions of 23 insertion, deletion, or missense mutations within an 81-bp fragment of rpoB, the gene encoding the beta-subunit of the DNA-dependent RNA polymerase of Mycobacterium tuberculosis, to the development of resistance to rifamycins (rifampin, rifabutin, rifapentine, and KRM-1648) in 29 rifampin-resistant clinical isolates were defined. Specific mutant rpoB alleles led to the d...

Journal: :Journal of microbiology, immunology, and infection = Wei mian yu gan ran za zhi 2013
Yun-Ho Lin Chun-Hsi Tai Chia-Ru Li Chin-Fu Lin Zhi-Yuan Shi

BACKGROUND/PURPOSE The rifampicin resistance of Mycobacterium tuberculosis is caused by mutations in the 81-base pair region of the rpoB gene encoding the β-subunit of RNA polymerase. Sequences of the rpoB gene of 68 isolates were analyzed to identify the mutations and to compare the mutations with their related susceptibilities. METHODS Susceptibility tests of 68 M. tuberculosis isolates, co...

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