Cancer is a ruthless disease that has no definite cure and it very consequential to treat it. Chemotherapy other cancer treatments have lasting negative effects on patients, like fatigue, diarrhea, nausea, many harmful side effects. To decrease the time period of vigorous chemotherapy, should be detected early. Pathologists clinicians used methods diagnosis over years, but do this, large amount...

SUMMARY We present our protein-protein interaction (PPI) network visualization system RobinViz (reliability-oriented bioinformatic networks visualization). Clustering the PPI network based on gene ontology (GO) annotations or biclustered gene expression data, providing a clustered visualization model based on a central/peripheral duality, computing layouts with algorithms specialized for intera...

MOTIVATION Next-generation sequencing technologies have led to the widespread use of -omic applications. As a result, there is now a pronounced bioinformatic bottleneck. The general model organism database (GMOD) tool kit (http://gmod.org) has produced a number of resources aimed at addressing this issue. It lacks, however, a robust online solution that can deploy heterogeneous data and softwar...

Analysis of genetic population structure an endangered Serranid fish species in the South Korean waters: a bioinformatic simulationKhaled Mohammed-Geba

Cells and organisms are governed by networks of genetic, physical and metabolic interactions between proteins and other their substrates, such as DNA, RNA, and other biologically important molecules. Large scale experimental studies of interactions between components of biological systems have been performed for a variety of eukaryotic organisms. However, there is a dearth of such data for plan...

The grid is a promising tool to resolve the crucial issue of software and data integration in biology. In this paper, we have reported on our experience in the deployment of bioinformatic grid applications within the framework of the DataGrid project. These applications inquired the potential impact of grids for CPU demanding algorithms and bioinformatics web portals and for the update and dist...