نتایج جستجو برای: l1 retrotransposon

تعداد نتایج: 34435  

Journal: :Human mutation 2006
Jianxin Wang Lei Song Deepak Grover Sami Azrak Mark A Batzer Ping Liang

Retrotransposons constitute over 40% of the human genome and play important roles in the evolution of the genome. Since certain types of retrotransposons, particularly members of the Alu, L1, and SVA families, are still active, their recent and ongoing propagation generates a unique and important class of human genomic diversity/polymorphism (for the presence and absence of an insertion) with s...

2016
Sabine Klawitter Nina V. Fuchs Kyle R. Upton Martin Muñoz-Lopez Ruchi Shukla Jichang Wang Marta Garcia-Cañadas Cesar Lopez-Ruiz Daniel J. Gerhardt Attila Sebe Ivana Grabundzija Sylvia Merkert Patricia Gerdes J. Andres Pulgarin Anja Bock Ulrike Held Anett Witthuhn Alexandra Haase Balázs Sarkadi Johannes Löwer Ernst J. Wolvetang Ulrich Martin Zoltán Ivics Zsuzsanna Izsvák Jose L. Garcia-Perez Geoffrey J. Faulkner Gerald G. Schumann

Human induced pluripotent stem cells (hiPSCs) are capable of unlimited proliferation and can differentiate in vitro to generate derivatives of the three primary germ layers. Genetic and epigenetic abnormalities have been reported by Wissing and colleagues to occur during hiPSC derivation, including mobilization of engineered LINE-1 (L1) retrotransposons. However, incidence and functional impact...

Journal: :Journal of Biomedicine and Biotechnology 2006
Sandra L. Martin

LINE-1 or L1 is an autonomous non-LTR retrotransposon in mammals. Retrotransposition requires the function of the two L1-encoded polypeptides, ORF1p and ORF2p. Early recognition of regions of homology between the predicted amino acid sequence of ORF2 and known endonuclease and reverse transcriptase enzymes led to testable hypotheses regarding the function of ORF2p in retrotransposition. As pred...

Journal: :Genome research 2004
Stéphane Boissinot Ali Entezam Lynn Young Peter J Munson Anthony V Furano

As humans contain a currently active L1 (LINE-1) non-LTR retrotransposon family (Ta-1), the human genome database likely provides only a partial picture of Ta-1-generated diversity. We used a non-biased method to clone Ta-1 retrotransposon-containing loci from representatives of four ethnic populations. We obtained 277 distinct Ta-1 loci and identified an additional 67 loci in the human genome ...

2016
Thomas J. Meyer Ulrike Held Kimberly A. Nevonen Sabine Klawitter Thomas Pirzer Lucia Carbone Gerald G. Schumann

LINE-Alu-VNTR-Alu-like (LAVA) elements comprise a family of non-autonomous, composite, non-LTR retrotransposons specific to gibbons and may have played a role in the evolution of this lineage. A full-length LAVA element consists of portions of repeats found in most primate genomes: CT-rich, Alu-like, and VNTR regions from the SVA retrotransposon, and portions of the AluSz and L1ME5 elements. To...

2013
Suresh Peddigari Patrick Wai-Lun Li Jennifer L. Rabe Sandra L. Martin

Long INterspersed Element one (LINE-1, or L1), is a widely distributed, autonomous retrotransposon in mammalian genomes. During retrotransposition, L1 RNA functions first as a dicistronic mRNA and then as a template for cDNA synthesis. Previously, we defined internal ribosome entry sequences (IRESs) upstream of both ORFs (ORF1 and ORF2) in the dicistronic mRNA encoded by mouse L1. Here, RNA aff...

2013
Geoffrey J. Faulkner

Fossilised mobile genetic elements, including Long Interspersed Element-1 (LINE-1 or L1) retrotransposons, comprise at least two-thirds of the human genome [1]. Their molecular history is reminiscent of speciation and natural selection, where, as noted by Carl Sagan, ‘‘Extinction is the rule. Survival is the exception’’ [2]. Broadly, the life cycle of a retrotransposon begins with innovation to...

2017
Prescott Deininger Maria E. Morales Travis B. White Melody Baddoo Dale J. Hedges Geraldine Servant Sudesh Srivastav Madison E. Smither Monica Concha Dawn L. DeHaro Erik K. Flemington Victoria P. Belancio

L1 elements represent the only currently active, autonomous retrotransposon in the human genome, and they make major contributions to human genetic instability. The vast majority of the 500 000 L1 elements in the genome are defective, and only a relatively few can contribute to the retrotransposition process. However, there is currently no comprehensive approach to identify the specific loci th...

2017
Emma C. Scott Scott E. Devine

The human LINE-1 (or L1) element is a non-LTR retrotransposon that is mobilized through an RNA intermediate by an L1-encoded reverse transcriptase and other L1-encoded proteins. L1 elements remain actively mobile today and continue to mutagenize human genomes. Importantly, when new insertions disrupt gene function, they can cause diseases. Historically, L1s were thought to be active in the germ...

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