Protein phosphorylation is one of the most widespread regulatory mechanisms in eukaryotes. Over the past decade, phosphorylation site prediction has emerged as an important problem in the field of bioinformatics. Here, we report a new method, termed Random Forest-based Phosphosite predictor 2.0 (RF-Phos 2.0), to predict phosphorylation sites given only the primary amino acid sequence of a prote...

Background: Multiple sclerosis (MS) is a degenerative inflammatory disease which is most commonly diagnosed by magnetic resonance imaging (MRI). But, since the MRI device uses of a magnetic field, if there are metal objects in the patient's body, it can disrupt the health of the patient, the functioning of the MRI, and distortion in the images. Due to limitations of using MRI device, screening ...

Due to urbanization and population increase, need for metro tunnels, has been considerably increased in urban areas. Estimating the surface settlement caused by tunnel excavation is an important task especially where the tunnels are excavated in urban areas or beneath important structures. Many models have been established for this purpose by extracting the relationship between the settlement a...

In this study, we present the performance of Random Forest (RF) and Support Vector Machine (SVM) in facial recognition. Random Forest Tree (RFT) based algorithm is popular in computer vision and in solving the facial recognition. SVM is a machine learning method and has been used for classification of face recognition. The kernel parameters were used for optimization. The testing has been compo...

In this paper, we study spectrum sensing based on dimensionality reduction and random forest (RF) in low signal-to-noise ratio environments. Classifications of three digital modulation types, including BPSK, OFDM and 2FSK, are investigated. From the received radio signal, a set of cyclic spectrum features are first calculated, and the principal component analysis (PCA) is applied to extract the...

Many metric-based classification models have been developed and applied to software fault-proneness prediction. This paper presents a novel prediction model using Random Forest classifier. Random Forest (RF) can be a promising candidate for software quality prediction because it is one of the most accurate classification algorithms available and has strengths in noise handling and efficient run...

This study aims to examine the ability of free floating aquatic plants to remove phosphorus and to predict the reduction of phosphorus from rice mill wastewater using soft computing techniques. A mesocosm study was conducted at the mill premises under normal conditions, and reliable results were obtained. Four aquatic plants, namely water hyacinth, water lettuce, salvinia, and duckweed were use...

Ensemble learning is a machine learning approach that utilises a number of classifiers to contribute via voting to identifying the class label for any unlabelled instances. Random Forests RF is an ensemble classification approach that has proved its high accuracy and superiority. However, most of the commonly used selection methods are static. Motivated by the idea of having self-optimised RF c...