نتایج جستجو برای: enhancers

تعداد نتایج: 6414  

Journal: :The Journal of biological chemistry 2013
Mack Y Su Laurie A Steiner Hannah Bogardus Tejaswini Mishra Vincent P Schulz Ross C Hardison Patrick G Gallagher

Identification of cell type-specific enhancers is important for understanding the regulation of programs controlling cellular development and differentiation. Enhancers are typically marked by the co-transcriptional activator protein p300 or by groups of cell-expressed transcription factors. We hypothesized that a unique set of enhancers regulates gene expression in human erythroid cells, a hig...

A Jalali E Moghimipour R L?benberg SA Sajjadi Tabassi

There have been numerous efforts to formulate insulin into an oral dosage form. The major problems involved with the oral administration of insulin are acidic and enzymatic decomposition by the gastric medium, and poor absorption in the small intestine due to its macromolecular structure. This study attempted to test the enhancing ability of two absorption enhancers, sodium glycocholate (Na-G...

Journal: :Biological chemistry 2015
Walter Schaffner

Transcriptional enhancers are short (200-1500 base pairs) DNA segments that are able to dramatically boost transcription from the promoter of a target gene. Originally discovered in simian virus 40 (SV40), a small DNA virus, transcription enhancers were soon also found in immunoglobulin genes and other cellular genes as key determinants of cell-type-specific gene expression. Enhancers can exert...

2015
Jacques P Bothma Hernan G Garcia Samuel Ng Michael W Perry Thomas Gregor Michael Levine Robb Krumlauf

Metazoan genes are embedded in a rich milieu of regulatory information that often includes multiple enhancers possessing overlapping activities. In this study, we employ quantitative live imaging methods to assess the function of pairs of primary and shadow enhancers in the regulation of key patterning genes-knirps, hunchback, and snail-in developing Drosophila embryos. The knirps enhancers exh...

Journal: :Cell 2013
Jakob Lovén Heather A. Hoke Charles Y. Lin Ashley Lau David A. Orlando Christopher R. Vakoc James E. Bradner Tong Ihn Lee Richard A. Young

Chromatin regulators have become attractive targets for cancer therapy, but it is unclear why inhibition of these ubiquitous regulators should have gene-specific effects in tumor cells. Here, we investigate how inhibition of the widely expressed transcriptional coactivator BRD4 leads to selective inhibition of the MYC oncogene in multiple myeloma (MM). BRD4 and Mediator were found to co-occupy ...

Journal: :Cell 2013
Warren A. Whyte David A. Orlando Denes Hnisz Brian J. Abraham Charles Y. Lin Michael H. Kagey Peter B. Rahl Tong Ihn Lee Richard A. Young

Master transcription factors Oct4, Sox2, and Nanog bind enhancer elements and recruit Mediator to activate much of the gene expression program of pluripotent embryonic stem cells (ESCs). We report here that the ESC master transcription factors form unusual enhancer domains at most genes that control the pluripotent state. These domains, which we call super-enhancers, consist of clusters of enha...

2017
Lily Li Zeba Wunderlich

Enhancers drive the gene expression patterns required for virtually every process in metazoans. We propose that enhancer length and transcription factor (TF) binding site composition-the number and identity of TF binding sites-reflect the complexity of the enhancer's regulatory task. In development, we define regulatory task complexity as the number of fates specified in a set of cells at once....

2016
Diane E Dickel Iros Barozzi Yiwen Zhu Yoko Fukuda-Yuzawa Marco Osterwalder Brandon J Mannion Dalit May Cailyn H Spurrell Ingrid Plajzer-Frick Catherine S Pickle Elizabeth Lee Tyler H Garvin Momoe Kato Jennifer A Akiyama Veena Afzal Ah Young Lee David U Gorkin Bing Ren Edward M Rubin Axel Visel Len A Pennacchio

Whole-genome sequencing is identifying growing numbers of non-coding variants in human disease studies, but the lack of accurate functional annotations prevents their interpretation. We describe the genome-wide landscape of distant-acting enhancers active in the developing and adult human heart, an organ whose impairment is a predominant cause of mortality and morbidity. Using integrative analy...

2015
Haitham Ashoor Dimitris Kleftogiannis Aleksandar Radovanovic Vladimir B. Bajic

Enhancers are cis-acting DNA regulatory regions that play a key role in distal control of transcriptional activities. Identification of enhancers, coupled with a comprehensive functional analysis of their properties, could improve our understanding of complex gene transcription mechanisms and gene regulation processes in general. We developed DENdb, a centralized on-line repository of predicted...

Journal: :Development 1993
S Small D N Arnosti M Levine

The even-skipped (eve) promoter contains a series of enhancers that control the expression of different segmentation stripes in the Drosophila embryo. The stripe 3 enhancer is located 1.7 kb upstream of the stripe 2 enhancer. Here we demonstrate that these enhancers must be physically separated by a minimum distance for proper stripe expression. When they are directly coupled in either orientat...

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