This paper is concerned with the statistical development of our spatial-temporal data mining procedure, LASR (pronounced “laser”). LASR is the abbreviation for Longitudinal Analysis with Self-Registration of largep-small-n data. It was motivated by a study of “Neuromuscular Electrical Stimulation” experiments, where the data are noisy and heterogeneous, might not align from one session to anoth...

To assemble into functional structures, biopolymers search for global minima through their folding potential energy surfaces to find the native conformation. However, this process can be hindered by the presence of kinetic traps. Here, we present a new single-molecule technique, termed laser-assisted single-molecule refolding (LASR), to characterize kinetic traps at the single-molecule level. L...

Pseudomonas aeruginosa is an important pathogen that frequently associated with nosocomial infections. The goal of this work was to determine the relationship between quorum sensing system (QS) and production virulence factors in P. aeruginosa. A number 100 isolates were collected from various clinical sources different Mansoura university hospitals period April 2018 till 2019. PCR screening QS...

Pseudomonas aeruginosa pathogenic potential is controlled via multiple regulatory pathways, including three quorum sensing (QS) systems. LasR is a key QS signal receptor since it acts as a global transcriptional regulator required for optimal expression of main virulence factors. P. aeruginosa modulates the QS response by integrating this cell density-dependent circuit to environmental and meta...

Many members of the LuxR family of acyl-homoserine lactone (acyl-HSL)-dependent quorum-sensing transcriptional activators are thought to have the unusual characteristics of requiring the signal ligand during polypeptide synthesis to fold into an active conformation and of binding signal extraordinarily tightly. This is the case for the N-3-oxo-dodecanoyl-HSL-dependent Pseudomonas aeruginosa vir...

Cell-to-cell signaling involving N-acyl-homoserine lactone compounds termed autoinducers (AIs) is instrumental to virulence factor production and biofilm development by Pseudomonas aeruginosa. In order to determine the importance of cell-to-cell signaling during the colonization of mechanically ventilated patients, we collected 442 P. aeruginosa pulmonary isolates from 13 patients. Phenotypic c...

HIGHLIGHTS Essential oil (EO) of Niaouli is an inhibitor on biofilm formation P. aeruginosa. The main components EO act as possible inhibitors LasR. inhibition effect these molecules LasR verified by molecular docking. has effects cell viability fibroblast cells at high concentrations. a valuable essential for pharmaceutical applications.

Symbiotic interactions are indispensable for metazoan function, but their origin and evolution remain elusive. We use a controlled evolution experiment to demonstrate the emergence of novel commensal interactions between Pseudomonas aeruginosa, an initially pathogenic bacterium, and a metazoan host, Caenorhabditis elegans. We show that commensalism evolves through loss of virulence, because it ...

The role of Pseudomonas aeruginosa quorum-sensing systems in the lung infections associated with cystic fibrosis (CF) has not been examined. The purpose of this study was to determine if genes regulated by the LasR-LasI quorum-sensing system were coordinately regulated by the P. aeruginosa populations during the lung infections associated with CF. We also wanted to ascertain if there was a rela...

Quorum sensing is a chemical communication process that bacteria use to regulate collective behaviors. Disabling quorum-sensing circuits with small molecules has been proposed as a potential strategy to prevent bacterial pathogenicity. The human pathogen Pseudomonas aeruginosa uses quorum sensing to control virulence and biofilm formation. Here, we analyze synthetic molecules for inhibition of ...