نتایج جستجو برای: rpb2

تعداد نتایج: 348  

2013
Charles E. Kubicek Robert D. Chisholm Sachiko Takayama Diane K. Hawley

Transcription termination by RNA polymerase (Pol) II is an essential but poorly understood process. In eukaryotic nuclei, the 3' ends of mRNAs are generated by cleavage and polyadenylation, and the same sequence elements that specify that process are required for downstream release of the polymerase from the DNA. Although Pol II is known to bind proteins required for both events, few studies ha...

Journal: :The Journal of biological chemistry 2011
Maria L Kireeva Céline Domecq Benoit Coulombe Zachary F Burton Mikhail Kashlev

Fork loop 2 is a small semiconservative segment of the larger fork domain in the second largest Rpb2 subunit of RNA polymerase II (Pol II). This flexible loop, juxtaposed at the leading edge of transcription bubble, has been proposed to participate in DNA strand separation, translocation along DNA, and NTP loading to Pol II during elongation. Here we show that the Rpb2 mutant carrying a deletio...

Journal: :Mycologia 2014
Alexis Carlson Alfredo Justo David S Hibbett

Trametes is a cosmopolitan genus of white rot polypores, including the "turkey tail" fungus, T. versicolor. Although Trametes is one of the most familiar genera of polypores, its species-level taxonomy is unsettled. The ITS region is the most commonly used molecular marker for species delimitation in fungi, but it has been shown to have a low molecular variation in Trametes resulting in poorly ...

2016
J. Houbraken L. Wang H.B. Lee J.C. Frisvad

Subgenera and sections have traditionally been used in Penicillium classifications. In the past, this sectional classification was based on macro- and microscopic characters, and occasionally supplemented with physiological and/or extrolite data. Currently, 25 sections are accepted, largely based on phylogenetic data. Certain sections of subgenus Penicillium were never studied in detail using a...

Journal: :Mycologia 2006
Jean-Marc Moncalvo R Henrik Nilsson Brenda Koster Susie M Dunham Torsten Bernauer P Brandon Matheny Teresita M Porter Simona Margaritescu Michael Weiss Sigisfredo Garnica Eric Danell Gitta Langer Ewald Langer Ellen Larsson Karl-Henrik Larsson Rytas Vilgalys

We reassessed the circumscription of the cantharelloid clade and identified monophyletic groups by using nLSU, nSSU, mtSSU and RPB2 sequence data. Results agreed with earlier studies that placed the genera Cantharellus, Craterellus, Hydnum, Clavulina, Membranomyces, Multiclavula, Sistotrema, Botryobasidium and the family Ceratobasidiaceae in that clade. Phylogenetic analyses support monophyly o...

Journal: :New Disease Reports 2023

Crotalaria juncea (Fabaceae), also known as sunn hemp or Indian hemp, is a warm-season legume grown cover crop that provides nitrogen and organic-matter to soils, prevents weed growth suppresses nematode populations (Meagher et al., 2019). In September 2021, root rot symptoms were observed in fields distributed Cocula, Guerrero, Mexico. Diseased plants showed reduced growth, rot, chlorosis, wil...

2013
Sounak Ghosh-Roy Dhiman Das Debarati Chowdhury Michael J.Smerdon Ronita Nag Chaudhuri

Transcription coupled nucleotide excision repair (TCR) is a major pathway responsible for removal of helix distorting DNA lesions from transcriptionally active regions of the genome. Rad26, a key factor of the TCR pathway, is known to play a role during early steps of TCR. Here, we show that Rad26-mediated TCR is not absolutely dependent on active transcription elongation in budding yeast. As p...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2004
Yajuan J Liu Benjamin D Hall

The mode of evolution of the biologically diverse forms of ascomycetes is not well understood, largely because the descent relationships remain unresolved. By using sequences of the nuclear gene RPB2, we have inferred with considerable resolution the phylogenetic relationships between major groups within the phylum Ascomycota. These relationships allow us to deduce a historical pattern of body ...

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