What do you do to start reading distributed high performance and grid computing in computational biology? Searching the book that you love to read first or find an interesting book that will make you want to read? Everybody has difference with their reason of reading a book. Actuary, reading habit must be from earlier. Many people may be love to read, but not a book. It's not fault. Someone wil...

The aim of this report is to make a review on DNA computing: molecular biology is used to suggest a new way of solving a NP-complete problem. The idea (due to Leonard Adleman in Adl94]) is to use strands of DNA to encode the (instance of the) problem, and to manipulate them using techniques commonly available in any molecular biology laboratory, in order to simulate operations that select the s...

Dynamic programming is an important algorithm design technique in computational biology and scientific computing. Typical applications using this technique are very compute-intensive and suffer from long runtimes on sequential architectures. Parallel program design patterns provide a new tool to semi-automatically generate parallel programs. In this paper we present a new parallel pattern calle...

In this paper we investigate the interactions between biochemical reactions from the natural computing point of view. Natural computing (see, e.g., [6, 7]) is concerned with human-designed computing inspired by nature and with computation taking place in nature (i.e., it investigates processes taking place in nature in terms of information processing). The former strand of research is quite wel...

The aim of this report is to make a review on DNA computing: molecular biology is used to suggest a new way of solving a NP-complete problem. The idea (due to Leonard Adleman in Adl94]) is to use strands of DNA to encode the (instance of the) problem, and to manipulate them using techniques commonly available in any molecular biology laboratory, in order to simulate operations that select the s...

Franck Raynaud, Mark E. Ambühl ∗,1 Chiara Gabella, Alicia Bornert, Ivo F. Sbalzarini, 3 Jean-Jacques Meister, and Alexander B. Verkhovsky Laboratory of Cell Biophysics, Ecole Polytechnique Fédérale de Lausanne, 1015 Lausanne, Switzerland MOSAIC Group, Chair of Scientific Computing for Systems Biology, Faculty of Computer Science, TU Dresden, D-01069 Dresden, Germany MOSAIC Group, Center for Sys...