نتایج جستجو برای: direct genotyping

تعداد نتایج: 447487  

Journal: :BioTechniques 2002
Peter A Bell Surendra Chaturvedi Craig A Gelfand Ching Yu Huang Michael Kochersperger Rafael Kopla Frank Modica Mark Pohl Shobha Varde Renbin Zhao Xiaojian Zhao Michael T Boyce-Jacino Azzam Yassen

Single nucleotide polymorphism (SNP) genotyping is playing an increasing role in genome mapping, pharmacogenetic studies, and drug discovery. To date, genome-wide scans and studies involving thousands of SNPs and samples have been hampered by the lack of a system that can perform genotyping with cost-effective throughput, accuracy, and reliability. To address this need, Orrhid has developed an ...

Journal: :iranian journal of biotechnology 2013
shima fayaz pezhman fard-esfahani shahnaz khaghani

background: the high resolution melting (hrm) method is a new scanning method for detecting unknown changes in dna and its advantages have persuaded researchers to recruit it as a screening method. objectives: here, we developed a hrm method to screen r188h snp (rs3218536) of xrcc2 and compared the results with a well known pcr-rflp technique. materials and methods: genomic dna samples from 350...

Journal: :Molecular biology and evolution 2010
Anders Albrechtsen Finn Cilius Nielsen Rasmus Nielsen

Chip-based high-throughput genotyping has facilitated genome-wide studies of genetic diversity. Many studies have utilized these large data sets to make inferences about the demographic history of human populations using measures of genetic differentiation such as F(ST) or principal component analyses. However, the single nucleotide polymorphism (SNP) chip data suffer from ascertainment biases ...

Journal: :International journal of clinical and experimental pathology 2014
Chunxia Chen Siyue Li Xiaojun Lu Bin Tan Chunyan Huang Li Qin

Single nucleotide polymorphisms (SNPs) of VKORC (1173T/C, rs9934438) and CYP2C9 (1075A/C, rs1057910) are major contributory factors on the sensitivity of warfarin in Chinese. Analysis of the two genomic loci could help warfarin treatment individual from bleeding or thrombosis events. An assay with the advantages of simplicity, speed, high sensitivity and low cost for genotyping is calling for c...

Journal: :BMC Biotechnology 2004
Rebecca Pask Helen E Rance Bryan J Barratt Sarah Nutland Deborah J Smyth Meera Sebastian Rebecca CJ Twells Anne Smith Alex C Lam Luc J Smink Neil M Walker John A Todd

BACKGROUND Sustainable DNA resources and reliable high-throughput genotyping methods are required for large-scale, long-term genetic association studies. In the genetic dissection of common disease it is now recognised that thousands of samples and hundreds of thousands of markers, mostly single nucleotide polymorphisms (SNPs), will have to be analysed. In order to achieve these aims, both an a...

2014
Hye-Eun Jeong Su-Jun Lee Eun-Young Cha Eun-Young Kim Ho-Sook Kim Young Hwan Song Jae-Gook Shin

There has been a wide range of inter-individual variations in platelet responses to clopidogrel. The variations in response to clopidogrel can be driven by genetic polymorphisms involved in the pathway of absorption, distribution, metabolism, excretion, and the target receptor P2Y12. A set of genetic variants known for causing variations in clopidogrel responses was selected, which included CYP...

Journal: :Plant physiology 2005
Samuel P Hazen Justin O Borevitz Frank G Harmon Jose L Pruneda-Paz Thomas F Schultz Marcelo J Yanovsky Sarah J Liljegren Joseph R Ecker Steve A Kay

Classical forward genetics, the identification of genes responsible for mutant phenotypes, remains an important part of functional characterization of the genome. With the advent of extensive genome sequence, phenotyping and genotyping remain the critical limiting variables in the process of map-based cloning. Here, we reduce the genotyping problem by hybridizing labeled genomic DNA to the Affy...

Journal: :Methods in molecular biology 2010
David Griffiths Warren Fawley Melina Kachrimanidou Rory Bowden Derrick W Crook Rowena Fung Tanya Golubchik Rosalind M Harding Katie J M Jeffery Keith A Jolley Richard Kirton Tim E Peto Gareth Rees Nicole Stoesser Alison Vaughan A Sarah Walker Bernadette C Young Mark Wilcox Kate E Dingle

A robust high-throughput multilocus sequence typing (MLST) scheme for Clostridium difficile was developed and validated using a diverse collection of 50 reference isolates representing 45 different PCR ribotypes and 102 isolates from recent clinical samples. A total of 49 PCR ribotypes were represented overall. All isolates were typed by MLST and yielded 40 sequence types (STs). A web-accessibl...

پایان نامه :دانشگاه آزاد اسلامی - دانشگاه آزاد اسلامی واحد گرمسار - دانشکده علوم انسانی 1390

this study examined the effects of collaborative strategic reading and direct instruction in persuasion on iranian high school students persuasive writing and attitudes. students in three intact classes were assigned to one of three treatment conditions: collaborative strategic reading and direct instruction in persuasion or direct instruction in persuasion or a control group. treatment effects...

Journal: :Molecular medicine reports 2011
Jin Kyung Lee Young Jun Hong Tae Hyun Um Eun Hee Lee Hyun-Sook Chi Jae Soo Koh Hyeon Woo Yim Young Joo Cha

A polymerase chain reaction-restriction fragment mass polymorphism (PCR-RFMP) assay protocol using PGMY09/11 primers for the detection and identification of human papillomavirus (HPV) has recently been developed. The present study evaluated the analytical sensitivity and clinical utility of HPV genotyping employing PCR-RFMP as compared to direct sequencing. Serial dilutions of cloned HPV DNA we...

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