Long terminal repeat (LTR) retrotransposons are the major class I mobile elements in plants. They play crucial roles in gene expansion, diversification and evolution. However, their captured genes are yet to be genome-widely identified and characterized in most of plants although many genomes have been completely sequenced. In this study, we have identified 7,043 and 23,915 full-length LTR retr...

Output characteristics of fuel cells are affected by a large number of parameters such as geometry, dimensions, construction materials and conditions of supplying fluids. In this paper a mathematical model followed by a two-dimensional numerical approach has been presented to study the fuel cell parametrically. Effect of oxygen concentration at gas diffusion layer entrance, temperature and ...

in this paper, the rolling force and reduction ratio have been investigated in multilayer strip rolling. for this purpose, two different set of multilayers have been selected which are al/st/al and cu/al/cu layouts. at first, the validation of the numerical analysis was performed by using an experimental test. after validation of the numerical results, two set of multilayer layouts were simulat...

patients and methods this cross-sectional study included a total of 120 adult predialysis ckd patients. forty patients were allocated in each predialysis ckd group of stages 3, 4, and 5. serum ctnt and hs-crp, plasma nt-probnp, and single spot urine albumin creatinine ratio (acr) were measured. ultrasonographic examination of carotid artery was done with 7.5 mhz linear probe in b mode ultrasono...

UV irradiation has been shown to activate the human immunodeficiency virus type 1 (HIV-1) long terminal repeat (LTR) in cell culture; however, only limited studies have been described in vivo. UV light has been categorized as UV-A (400 to 315 nm), -B (315 to 280 nm), or -C (less than 280 nm); the longer wavelengths are less harmful but more penetrative. Highly penetrative UV-A radiation constit...

LTR retrotransposons are repetitive DNA elements comprising ∼10% of the human genome. However, LTR sequences are disproportionately present in human long, non-coding RNAs (lncRNAs). Whether and how the LTR lncRNAs serve biological functions are largely unknown. Here we show that in primary human erythroblasts, lncRNAs transcribed from the LTR retrotransposons of ERV-9 human endogenous retroviru...

We focused on transcription factors and epigenetic marks that regulate the B3GALT5 gene through its retroviral long terminal repeat (LTR) promoter. We compared the expression levels of the B3GALT5 LTR transcript, quantitated by competitive RT-PCR, with those of the candidate transcription factors HNF1α/β and Cdx1/2, determined by Western blot analysis, in colon cancer biopsies, various cell lin...

We sequenced the large terminal repeats (LTRs) present in infectious cloned DNA segments of leukemogenic, mink cell focusforming MCF13 and non-leukemogenic, MCF111A murine leukemia viruses (MuLVs; 1). We compare these sequences with LTRs of AKR ecotropic (AKR ECO; 2), NZB xenotropic (NZB XENO; 3) and MCF247 (4) MuLV DNAs. MCF111A LTR is used as the "standard." Dots show identity; blank space, a...

HIV-1 provirus, either as a chromosomal integrant or as an episomal plasmid in HeLa cells, forms a transcription-dependent gene loop structure between the 5'LTR promoter and 3'LTR poly(A) signal. Flavopiridol-mediated inhibition of RNA polymerase II elongation blocks 5' to 3'LTR juxtaposition, indicating that this structure is maintained during transcription. Analysis of mutant or hybrid HIV-1 ...

To examine the potential regulatory involvement of retroelements in the human genome, we screened the transcribed sequences of GenBank and expressed sequence tag data bases with long terminal repeat (LTR) elements derived from different human endogenous retroviruses. These screenings detected human transcripts containing LTRs belonging to the human endogenous retrovirus-E family fused to the ap...