نتایج جستجو برای: haloarcula sp iru1

تعداد نتایج: 120431  

Journal: :Proceedings of the National Academy of Sciences of the United States of America 2007
Moeava Tehei Bruno Franzetti Kathleen Wood Frank Gabel Elisa Fabiani Marion Jasnin Michaela Zamponi Dieter Oesterhelt Giuseppe Zaccai Margaret Ginzburg Ben-Zion Ginzburg

Intracellular water dynamics in Haloarcula marismortui, an extremely halophilic organism originally isolated from the Dead Sea, was studied by neutron scattering. The water in centrifuged cell pellets was examined by means of two spectrometers, IN6 and IN16, sensitive to motions with time scales of 10 ps and 1 ns, respectively. From IN6 data, a translational diffusion constant of 1.3 x 10(-5) c...

Journal: :Nucleic Acids Research 2005
Qin Zhao Uma Nagaswamy Hunjoong Lee Youlin Xia Hung-Chung Huang Xiaolian Gao George E. Fox

Helix 42 of Domain II of Escherichia coli 23S ribosomal RNA underlies the L7/L12 stalk in the ribosome and may be significant in positioning this feature relative to the rest of the 50S ribosomal subunit. Unlike the Haloarcula marismortui and Deinococcus radiodurans examples, the lower portion of helix 42 in E.coli contains two consecutive G*A oppositions with both adenines on the same side of ...

Journal: :Genome research 2004
Nitin S Baliga Richard Bonneau Marc T Facciotti Min Pan Gustavo Glusman Eric W Deutsch Paul Shannon Yulun Chiu Rueyhung Sting Weng Rueichi Richie Gan Pingliang Hung Shailesh V Date Edward Marcotte Leroy Hood Wailap Victor Ng

We report the complete sequence of the 4,274,642-bp genome of Haloarcula marismortui, a halophilic archaeal isolate from the Dead Sea. The genome is organized into nine circular replicons of varying G+C compositions ranging from 54% to 62%. Comparison of the genome architectures of Halobacterium sp. NRC-1 and H. marismortui suggests a common ancestor for the two organisms and a genome of signif...

Journal: :Biochimica et biophysica acta 2001
R Willumeit G Diedrich S Forthmann J Beckmann R P May H B Stuhrmann K H Nierhaus

Mapping of protein positions in the ribosomal subunits was first achieved for the 30S subunit by means of neutron scattering about 15 years ago. Since the 50S subunit is almost twice as large as the 30S subunit and consists of more proteins, it was difficult to apply classical contrast variation techniques for the localisation of the proteins. Polarisation dependent neutron scattering (spin-con...

Journal: :Science 1995
O Dym M Mevarech J L Sussman

The high-resolution structure of halophilic malate dehydrogenase (hMDH) from the archaebacterium Haloarcula marismortui was determined by x-ray crystallography. Comparison of the three-dimensional structures of hMDH and its nonhalophilic congeners reveals structural features that may promote the stability of hMDH at high salt concentrations. These features include an excess of acidic over basic...

Journal: :Physical chemistry chemical physics : PCCP 2010
Marion Jasnin Andreas Stadler Moeava Tehei Giuseppe Zaccai

Neutron scattering, by using deuterium labelling, revealed how intracellular water dynamics, measured in vivo in E. coli, human red blood cells and the extreme halophile, Haloarcula marismortui, depends on the cell type and nature of the cytoplasm. The method uniquely permits the determination of motions on the molecular length (approximately ångstrøm) and time (pico- to nanosecond) scales. In ...

Journal: :Polish journal of microbiology 2012
Evrim Yildiz Birgul Ozcan Mahmut Caliskan

The haloarchaeal diversity of a salt mine, a natural cave in central Anatolia, was investigated using convential microbiological and molecular biology methods. Eight halophilic archaeal isolates selected based on their colony morphology and whole cell protein profiles were taxonomically classified on the basis of their morphological, physiological, biochemical properties, polar lipid and protei...

Journal: :Structure 1999
J Harms A Tocilj I Levin I Agmon H Stark I Kölln M van Heel M Cuff F Schlünzen A Bashan F Franceschi A Yonath

BACKGROUND Ribosomes are the universal cellular organelles that accomplish the translation of the genetic code into proteins. Electron cryo-microscopy (cryo-EM) has yielded fairly detailed three-dimensional reconstructions of ribosomes. These were used to assist in the determination of higher resolution structures by X-ray crystallography. RESULTS Molecular replacement studies using cryo-EM r...

Journal: :Journal of structural biology 1999
S Weinstein W Jahn C Glotz F Schlünzen I Levin D Janell J Harms I Kölln H A Hansen M Glühmann W S Bennett H Bartels A Bashan I Agmon M Kessler M Pioletti H Avila K Anagnostopoulos M Peretz T Auerbach F Franceschi A Yonath

Procedures were developed exploiting organometallic clusters and coordination compounds in combination with heavy metal salts for derivatization of ribosomal crystals. These enabled the construction of multiple isomorphous replacement (MIR) and multiple isomorphous replacement combined with anomalous scattering medium-resolution electron density maps for the ribosomal particles that yield the c...

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