Abstract Tomato bacterial canker, caused by Clavibacter michiganensis subsp. ( Cmm ) (Li et al. 2018), is a common destructive disease worldwide. The bacterium colonizes plant’s vascular system causing characteristic symptoms such as wilting, cankers, brown and black discoloration of vessels, white spots on the fruit leaves. In present work, isolates were collected from infected tomato plants 1...

Today, software developers utilize different general-purpose (GPL) and domain-specific languages (DSL) to implement multi-language software applications (MLSA). MLSAs, thus, contain artifacts of different GPLs and DSLs, e.g., sourcecode files and configurations. In a recent study we found that refactoring an artifact can break artifact interaction and that interaction cannot be re-established b...

Aquaculture is a fast growing industry with its development hampered by bacterial diseases. Vibriosis caused Harveyi clade strains known for causing heavy loss especially in shrimp aquaculture farms. For farm treatment and pathogen spread management, veterinarians researchers need reliable identification tools. A range of methods have been presented Vibrio spp. recent literature but little feed...

Whatever else they should share, strains of bacteria assigned to the same species should have house-keeping genes that are similar in sequence. Single gene sequences (or rRNA gene sequences) have very few informative sites to resolve the strains of closely related species, and relationships among similar species may be confounded by interspecies recombination. A more promising approach (multilo...

Vibrio cholerae and Vibrio mimicus have similar phenotypes and genomes making rapid differentiation of these two species difficult. The first standard multilocus sequence analysis (MLSA) scheme for the identification of these species is described. A collection of 45 representative isolates from different geographical regions and hosts was examined using segments of the housekeeping genes pyrH, ...

Recently, a novel species, Mycobacterium yongonense (DSM 45126(T)), was introduced and while it is phylogenetically related to Mycobacterium intracellulare, it has a distinct RNA polymerase β-subunit gene (rpoB) sequence that is identical to that of Mycobacterium parascrofulaceum, which is a distantly related scotochromogen, which suggests the acquisition of the rpoB gene via a potential latera...

Marine Bacteroidetes constitute a very abundant bacterioplankton group in the oceans that plays a key role in recycling particulate organic matter and includes several photoheterotrophic members containing proteorhodopsin. Relatively few marine Bacteroidetes species have been described and, moreover, they correspond to cultured isolates, which in most cases do not represent the actual abundant ...