نتایج جستجو برای: splice variant

تعداد نتایج: 106832  

2006
Erik van Nimwegen Mihaela Zavolan

In their letter Hiller et al. mention the conservation test that was performed in [1] and the more recent results of Akerman and Mandel-Gutfreund [2]. To explain our interpretation of these results we first briefly describe our rough hypothesis for the origin of the bulk of NAGNAG splice variations. We believe that in general the splicing machinery splices invariantly at the first AG that follo...

2017
Wai-Heng Lua Wei-Li Ling Chinh Tran-To Su Joshua Yi Yeo Chandra Shekhar Verma Birgit Eisenhaber Frank Eisenhaber Samuel Ken-En Gan

The IgA receptor, Fcar (CD89) consists of 5 sequence segments: 2 segments (S1, S2) forming the potential signal peptide, 2 extracellular EC domains that include the IgA binding site, and the transmembrane and cytoplasmic tail (TM/C) region. Numerous Fcar splice variants have been reported with various combinations of the sequence segments mentioned above. Here, we report a novel splice variant ...

2014
Pamela Bielli Matteo Bordi Valentina Di Biasio Claudio Sette

Alternative splicing (AS) modulates many physiological and pathological processes. For instance, AS of the BCL-X gene balances cell survival and apoptosis in development and cancer. Herein, we identified the polypyrimidine tract binding protein (PTBP1) as a direct regulator of BCL-X AS. Overexpression of PTBP1 promotes selection of the distal 5' splice site in BCL-X exon 2, generating the pro-a...

2014
Azeez Butali Peter A Mossey Wasiu L Adeyemo Mekonen A Eshete LauRen A Gaines Dee Even Ramat O Braimah Babatunde S Aregbesola Jennifer V Rigdon Christian I Emeka Olutayo James Mobolanle O Ogunlewe Akinola L Ladeinde Fikre Abate Taye Hailu Ibrahim Mohammed Paul E Gravem Milliard Deribew Mulualem Gesses Adebowale A Adeyemo Jeffrey C Murray

Orofacial clefts (OFC) are complex genetic traits that are often classified as syndromic or nonsyndromic clefts. Currently, there are over 500 types of syndromic clefts in the Online Mendelian Inheritance in Man (OMIM) database, of which Van der Woude syndrome (VWS) is one of the most common (accounting for 2% of all OFC). Popliteal pterygium syndrome (PPS) is considered to be a more severe for...

Journal: :Clinical journal of the American Society of Nephrology : CJASN 2009
Kiarong Wang Xiao Zhao Shelly Chan Onur Cil Ning He Xuewen Song Andrew D Paterson York Pei

BACKGROUND AND OBJECTIVES Mutation-based molecular diagnostics of autosomal dominant polycystic kidney disease (ADPKD) is complicated by locus and allelic heterogeneity, large multi-exon gene structure and duplication in PKD1, and a high level of unclassified variants. Comprehensive screening of PKD1 and PKD2 by two recent studies have shown that atypical splice mutations account for 3.5% to 5%...

2016
Alyssa Bottrell

THE ROLE OF PDGF C AND ITS SPLICE VARIANT IN BREAST CANCER

2016
Tohru Fukai

Receptor for Advanced Glycation Endproducts (RAGE), a transmembrane, multi-ligand, pattern recognition receptor, has been implicated in a range of inflammatory disease including diabetes, cancers, and cardiovascular disease (CVD) [1]. In addition to the full length receptor, soluble form of RAGE (sRAGE) has been shown to prevent the development of numerous pathologic states, and therefore highl...

Journal: :Bioinformatics 2018
Bahman Afsari Theresa Guo Michael Considine Liliana Florea Luciane T Kagohara Genevieve L Stein-O'Brien Dylan Kelley Emily Flam Kristina D Zambo Patrick K Ha Donald Geman Michael F Ochs Joseph A Califano Daria A Gaykalova Alexander V Favorov Elana J Fertig

Motivation Current bioinformatics methods to detect changes in gene isoform usage in distinct phenotypes compare the relative expected isoform usage in phenotypes. These statistics model differences in isoform usage in normal tissues, which have stable regulation of gene splicing. Pathological conditions, such as cancer, can have broken regulation of splicing that increases the heterogeneity of...

2003
Tadashi Kadowaki Satoshi Shiojima Gozoh Tsujimoto

Alternative splicing is the phenomena that the pre-mRNA transcript from DNA is processed into different mRNAs by spliced different types of introns. The organism can acquire proteins as many times as genes. Therefore to find such splicing variants is risen in the post genome era. We investigate a new method to detect splicing variants with the gene expression data by the oligonucleotide array t...

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