We here report the de novo transcriptome assembly and functional annotation of Eusirus cf. giganteus clade g3, providing first database expressed sequences from this giant Antarctic amphipod. RNA-sequencing, carried o... | Find, read cite all research you need on Tech Science Press

Neeraja M. Krishnan, Swetansu Pattnaik, S. A. Deepak, Arun K. Hariharan, Prakhar Gaur, Rakshit Chaudhary, Prachi Jain, Srividya Vaidyanathan, P. G. Bharath Krishna and Binay Panda* Ganit Labs, Bio-IT Centre, Institute of Bioinformatics and Applied Biotechnology, Biotech Park, Electronic City Phase I, Bangalore 560 100, India Strand Life Sciences, Kirloskar Business Park, Bellary Road, Hebbal, B...

RNA sequencing based on next-generation sequencing technology is useful for analyzing transcriptomes, discovering novel genes and studying exon/intron structures. Similar to genome assembly, de novo transcriptome assembly does not rely on a reference genome and additional annotated information. Most, if not all, existing de novo transcriptome assemblers rely heavily on de novo genome assembly t...

We present the application of heuristic search to in silico metabolic pathway engineering. In particular, we discuss a new computational approach to elucidate complex pathways and to address the practical challenge of combinatorial complexity in pathway inference. We have implemented this approach in a new computational framework, called PathMiner, which is useful for designing metabolic engine...

BACKGROUND Polygonum minus is an herbal plant in the Polygonaceae family which is rich in ethnomedicinal plants. The chemical composition and characteristic pungent fragrance of Polygonum minus have been extensively studied due to its culinary and medicinal properties. There are only a few transcriptome sequences available for species from this important family of medicinal plants. The limited ...

RNA sequencing based on next-generation sequencing technology is useful for analyzing transcriptomes, discovering novel genes and studying exon/intron structures. Similar to genome assembly, de novo transcriptome assembly does not rely on a reference genome and additional annotated information. Most, if not all, existing de novo transcriptome assemblers rely heavily on de novo genome assembly t...

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The current study was designed to investigate the actions of Anti-Müllerian Hormone (AMH) on primordial follicle assembly. Ovarian primordial follicles develop from the breakdown of oocyte nests during fetal development for the human and immediately after birth in rodents. AMH was found to inhibit primordial follicle assembly and decrease the initial primordial follicle pool size in a rat ovari...