mycoplasma agalactiae (m. agalactiae) is one of the main causes of contagious agalactia, an infectious syndrome of sheep and goats in khuzestan province –southwest of iran that is characterized by mastitis and subsequent failure of milk production, arthritis, abortion and keratoconjunctivitis. this study was carried out to isolation and identification of m. agalactiae with culture and polymeras...

contagious agalactia (c.a) is an infectious syndrome of sheep that is characterized by mastitis and subsequent failure of milk production, arthritis, abortion and keratoconjunctivitis. mycoplasma agalactiae (m. agalactiae) is the main cause of the disease in sheep. the aim of this study was isolation and identification of m. agalactiae with culture and polymerase chain reaction (pcr) assay f...

The silencing of one parental set of rRNA genes in a genetic hybrid is an epigenetic phenomenon known as nucleolar dominance. We showed previously that silencing is restricted to the nucleolus organizer regions (NORs), the loci where rRNA genes are tandemly arrayed, and does not spread to or from neighboring protein-coding genes. One hypothesis is that nucleolar dominance is the net result of h...

BACKGROUND Cryptosporidium spp. are common parasites of humans and animals. Farm animals, especially pre-weaned calves, are considered to be one of main animal reservoir hosts of Cryptosporidium in the transmission of human cryptosporidiosis. The aim of this study was to determine the distribution and genotypes of Cryptosporidium spp. in pre-weaned calves using molecular tools and to assess zoo...

Over a period of 26 months, we have evaluated in a prospective fashion the use of 16S rRNA gene sequencing as a means of identifying clinically relevant isolates of nonfermenting gram-negative bacilli (non-Pseudomonas aeruginosa) in the microbiology laboratory. The study was designed to compare phenotypic with molecular identification. Results of molecular analyses were compared with two commer...

A bacterial strain, DC-186(T), isolated from home-made compost, was characterized for its phenotypic and phylogenetic properties. The isolate was a Gram-negative rod that was able to grow at 15-36 degrees C and pH 5.5-8.0. Strain DC-186(T) was positive in tests for catalase, oxidase and beta-galactosidase activities and aesculin hydrolysis. The predominant fatty acids were the summed feature C(...

21 Rhodopirellula is an abundant marine member of the bacterial phylum 22 Planctomycetes. Cultivation studies revealed the presence of several closely related 23 Rhodopirellula species in European coastal sediments. Because the 16S rRNA gene 24 does not provide the desired taxonomic resolution to differentiate Rhodopirellula 25 species, we performed a comparison of the genomes of nine Rhodopire...

Taxonomy and identification of fastidious Gram negatives are evolving and challenging. We compared identifications achieved with the Vitek 2 Neisseria-Haemophilus (NH) card and partial 16S rRNA gene sequence (526 bp stretch) analysis with identifications obtained with extensive phenotypic characterization using 100 fastidious Gram negative bacteria. Seventy-five strains represented 21 of the 26...

23 Population analysis is persistently challenging but important, leading to the 24 determination of diversity and function prediction of microbial community members. 25 Here we detail our bioinformatics methods for analyzing population distribution and 26 diversity in large microbial communities. This was achieved via (i) a homology based 27 method for robust phylotype determination, equaling ...

Bacteria were isolated from the dental plaques of nine dogs and a sample of pooled saliva from five other dogs and were then identified by comparative 16S rRNA gene sequencing. Among 339 isolates, 84 different phylotypes belonging to 37 genera were identified. Approximately half of the phylotypes were identified to the species level, and 28% of these were considered members of the indigenous or...