background: crimean-congo hemorrhagic fever virus (cchfv) belongs to genus nairovirus and family bunyaviridae. the main aim of this study was to investigate the extent of recombination in s-segment genome of cchfv in iran. methods: samples were isolated from iranian patients and those available in genbank, and analyzed by phyloge­netic and bootscan methods. results: through comparison of the ph...

traditionally, capoeta populations from the southern caspian sea basin have been considered as capoeta capoeta gracilis. study on the phylogenetic relationship of capoeta species using mitochondrial cytochrome b gene sequences show that capoeta population from the southern caspian sea basin is distinct species and receive well support (posterior probability of 100%). based on the tree topologie...

The gene composition of present-day genomes has been shaped by a complicated evolutionary history, resulting in diverse distributions of genes across genomes. The pattern of presence and absence of a gene in different genomes is called its phylogenetic profile. It has been shown that proteins whose encoding genes have highly similar profiles tend to be functionally related: As these genes were ...

Phylogenetic networks are a generalisation of phylogenetic trees that allow for more complex evolutionary histories that include hybridisation-like processes. It is of considerable interest whether a network can be considered ‘tree-like’ or not, which lead to the introduction of tree-based networks in the rooted, binary context. Tree-based networks are those networks which can be constructed by...

An important problem in phylogenetics is the construction of phylogenetic trees. One way to approach this problem, known as the supertree method, involves inferring a phylogenetic tree with leaves consisting of a set $X$ of species from a collection of trees, each having leaf-set some subset of $X$. In the 1980's characterizations, certain inference rules were given for when a collection of 4-l...

Seedless barberry (Berberis vulgaris L. var. asperma) is one of the few crops that is only cultivated in eastern parts of Iran. As a new crop there has not been any study to identify phylogenetic relationships of this plant with other related species existing in Iran. In this study, Amplification fragment length polymorphism (AFLP) markers based on four selected primer combinations (EcoRI/Tru1I...

background and aims: avian influenza (ai) h9n2 subtype was first reported to infect turkeys in the united states in 1966 and has been panzootic in europe and asia. the impact of avian influenza caused by h9n2 viruses in iran is now significantly more severe than in previous years. methods: sequence analysis and phylogenetic study of the complete coding region polymerase a (pa) gene of h9n2 subt...

the quality traits of triticum dicoccoides ku-13441 (triticum turgidum l. var. dicoccoides (aabb, 2n= 4x= 28)) were analyzed by mixograph, and the results showed that t. dicoccoides ku-13441 had desirable qualities in gluten strength and flour stirring tolerance. subsequently, seventeen novel full-orf α-gliadin genes and thirty-five pseudogenes were cloned and sequenced from t. dicoccoides ku-1...

background: stearoyl-coa desaturase (scd) is a key enzyme that converts saturated fatty acids (sfas) to monounsaturated fatty acids (mufas) in fat biosynthesis. despite being crucial for interpreting scds’ roles across species, the evolutionary relationship of scd proteins across species has yet to be elucidated. this study aims to present this evolutionary relationship based on amino acid sequ...