نتایج جستجو برای: snps typing

تعداد نتایج: 45092  

2016
Haojun Jiang Yifan Xie Xuchao Li Huijuan Ge Yongqiang Deng Haofang Mu Xiaoli Feng Lu Yin Zhou Du Fang Chen Nongyue He

Short tandem repeats (STRs) and single nucleotide polymorphisms (SNPs) have been already used to perform noninvasive prenatal paternity testing from maternal plasma DNA. The frequently used technologies were PCR followed by capillary electrophoresis and SNP typing array, respectively. Here, we developed a noninvasive prenatal paternity testing (NIPAT) based on SNP typing with maternal plasma DN...

2016
Sarwar Azam Sashi Bhushan Rao Padmaja Jakka Veera NarasimhaRao Bindu Bhargavi Vivek Kumar Gupta Girish Radhakrishnan

Brucellosis is the most frequent zoonotic disease worldwide, with over 500,000 new human infections every year. Brucella melitensis, the most virulent species in humans, primarily affects goats and the zoonotic transmission occurs by ingestion of unpasteurized milk products or through direct contact with fetal tissues. Brucellosis is endemic in India but no information is available on populatio...

2016
Linda Odenthal-Hesse Julien Dutheil Fabian Klötzl Bernhard Haubold

MOTIVATION In many organisms, including humans, recombination clusters within recombination hotspots. The standard method for de novo detection of recombinants at hotspots is sperm typing. This relies on allele-specific PCR at single nucleotide polymorphisms. Designing allele-specific primers by hand is time-consuming. We have therefore written a package to support hotspot detection and analysi...

Journal: :The Medical journal of Australia 2016
Katherine A Bond Kerrie Stevens Dieter Bulach Kylie Carville Katherine S Ong Benjamin P Howden

The diagram illustrates the phylogenetic relationship between isolates based on core genome single nucleotide polymorphisms (SNPs). Victorian MenW ST11 isolates demonstrate region-specific clustering, and the close relationship of Victorian MenW strains (in green) to the United Kingdome South American cluster is shown. (Numerical values for the Victorian isolates represent the number of isolate...

2014
Sidra E. G. Vasconcellos Chyntia Carolina Acosta Lia Lima Gomes Emilyn Costa Conceição Karla Valéria Lima Marcelo Ivens de Araujo Maria de Lourdes Leite Flávio Tannure Paulo Cesar de Souza Caldas Harrison M. Gomes Adalberto Rezende Santos Michel K. Gomgnimbou Christophe Sola David Couvin Nalin Rastogi Neio Boechat Philip Noel Suffys Igor Mokrousov

Rio de Janeiro is endemic for tuberculosis (TB) and presents the second largest prevalence of the disease in Brazil. Here, we present the bacterial population structure of 218 isolates of Mycobacterium tuberculosis, derived from 186 patients that were diagnosed between January 2008 and December 2009. Genotypes were generated by means of spoligotyping, 24 MIRU-VNTR typing and presence of fbpC103...

Journal: :Clinical chemistry 2008
Connie M Westhoff Steven R Sloan

“Blood-Matching Goes Genetic,” a recent News Focus article in Science (1 ), illustrates the growing awareness of the impact of the genomics revolution on transfusion medicine and its potential to transform the way blood is selected for transfusion. Antibody-based technology has been the basis for blood group typing since the discovery of the ABO blood groups by Landsteiner and colleagues. With ...

Journal: :The Journal of antimicrobial chemotherapy 2014
Ella Trembizki Helen Smith Monica M Lahra Marcus Chen Basil Donovan Christopher K Fairley Rebecca Guy John Kaldor David Regan James Ward Michael D Nissen Theo P Sloots David M Whiley

OBJECTIVES Neisseria gonorrhoeae antimicrobial resistance (AMR) is a global problem heightened by emerging resistance to ceftriaxone. Appropriate molecular typing methods are important for understanding the emergence and spread of N. gonorrhoeae AMR. We report on the development, validation and testing of a Sequenom MassARRAY iPLEX method for multilocus sequence typing (MLST)-style genotyping o...

2018
Rana Jajou Albert de Neeling Erik Michael Rasmussen Anders Norman Arnout Mulder Rianne van Hunen Gerard de Vries Walid Haddad Richard Anthony Troels Lillebaek Wim van der Hoek Dick van Soolingen

In many countries, Mycobacterium tuberculosis isolates are routinely subjected to variable-number tandem-repeat (VNTR) typing to investigate M. tuberculosis transmission. Unexpectedly, cross-border clusters were identified among African refugees in the Netherlands and Denmark, although transmission in those countries was unlikely. Whole-genome sequencing (WGS) was applied to analyze transmissio...

Journal: :iranian journal of allergy, asthma and immunology 0
derek middleton

the last two decades have seen a massive growth in the application of dna technology in histocompatibility and immunogenetics. this review summarises the history and application of dna methods in this area.

Journal: :Iranian journal of microbiology 2015
Sakineh Seyed-Mohamadi Soheila Moradi Bidhendi Keyvan Tadayon Rainak Ghaderi

BACKGROUND AND OBJECTIVES Bacillus anthracis is one of the most homogenous bacteria ever described. Some level of diversity. Bacillus anthracis 17JB is a laboratory strain It is broadly used as a challenge strain in guinea pigs for potency test of anthrax vaccine. MATERIAL AND METHODS This work describes genetic characterization of B. anthracis 17 JB strain using the SNPs and MLVA genotyping....

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