نتایج جستجو برای: dehalogenase and non dehalogenases

تعداد نتایج: 17006963  

Journal: :Acta crystallographica. Section D, Biological crystallography 2014
Maryna Lahoda Jeroen R Mesters Alena Stsiapanava Radka Chaloupkova Michal Kuty Jiri Damborsky Ivana Kuta Smatanova

Haloalkane dehalogenases catalyze the hydrolytic cleavage of carbon-halogen bonds, which is a key step in the aerobic mineralization of many environmental pollutants. One important pollutant is the toxic and anthropogenic compound 1,2,3-trichloropropane (TCP). Rational design was combined with saturation mutagenesis to obtain the haloalkane dehalogenase variant DhaA31, which displays an increas...

Journal: :The Journal of biological chemistry 2004
René M de Jong Wim Brugman Gerrit J Poelarends Christian P Whitman Bauke W Dijkstra

Isomer-specific 3-chloroacrylic acid dehalogenases function in the bacterial degradation of 1,3-dichloropropene, a compound used in agriculture to kill plant-parasitic nematodes. The crystal structure of the heterohexameric trans-3-chloroacrylic acid dehalogenase (CaaD) from Pseudomonas pavonaceae 170 inactivated by 3-bromopropiolate shows that Glu-52 in the alpha-subunit is positioned to funct...

Journal: :Nature chemical biology 2014
Jan Sykora Jan Brezovsky Tana Koudelakova Maryna Lahoda Andrea Fortova Tatsiana Chernovets Radka Chaloupkova Veronika Stepankova Zbynek Prokop Ivana Kuta Smatanova Martin Hof Jiri Damborsky

We emphasize the importance of dynamics and hydration for enzymatic catalysis and protein design by transplanting the active site from a haloalkane dehalogenase with high enantioselectivity to nonselective dehalogenase. Protein crystallography confirms that the active site geometry of the redesigned dehalogenase matches that of the target, but its enantioselectivity remains low. Time-dependent ...

Journal: :Applied and environmental microbiology 1985
D B Janssen A Scheper L Dijkhuizen B Witholt

A bacterium that is able to utilize a number of halogenated short-chain hydrocarbons and halogenated carboxylic acids as sole carbon source for growth was identified as a strain of Xanthobacter autotrophicus. The organism constitutively produces two different dehalogenases. One enzyme is specific for halogenated alkanes, whereas the other, which is more heat stable and has a higher pH optimum, ...

Journal: :Journal of Tropical Life Science 2023

Dehalogenase-producing bacterium has been extensively studied due to their ability reduce pollution in the environment. A previous study reported that Bacillus megaterium WSH-002 contains a putative haloacid dehalogenase type II gene, therefore, presence of other genes associated with regulatory gene function and uptake halogenated compounds are expected. In whole genome, (DehWSH002) two relate...

Journal: :applied biotechnology reports 0
raghunath satpathy v. badireenath konkimalla jagnyeswar ratha

in this report, we describe a procedure for in-silico design of a novel haloalkane dehalogenase protein that exhibits luciferase property which can be potentially used in biosensor applications. from a pdb blast search, the selected haloalkane dehalogenase (pdb code: 1ede) had a close structural homology with a lucifearse (pdb code: 2psj chain a) sharing an identity of 33%. initially, the amino...

Journal: :Biotechnology journal 2013
Tana Koudelakova Sarka Bidmanova Pavel Dvorak Antonin Pavelka Radka Chaloupkova Zbynek Prokop Jiri Damborsky

Haloalkane dehalogenases (EC 3.8.1.5, HLDs) are α/β-hydrolases which act to cleave carbon-halogen bonds. Due to their unique catalytic mechanism, broad substrate specificity and high robustness, the members of this enzyme family have been employed in several practical applications: (i) biocatalytic preparation of optically pure building-blocks for organic synthesis; (ii) recycling of by-product...

پایان نامه :وزارت علوم، تحقیقات و فناوری - پژوهشگاه پلیمر و پتروشیمی ایران - پژوهشکده پتروشیمی 1389

this is an original study on the effect of a polyisobutylene – polydimethylsiloxane (pibpdms) block copolymer modifier used as an interfacial active agent on the dynamics behaviour of single newtonian drops suspended in a polyisobutylene (pib) newtonian matrix. the results were divided in two sections. the first part included the experiments carried out on the non-modified and 2% block cop...

Journal: :Biochemistry 2005
Jan Kmunícek Kamila Hynková Tomás Jedlicka Yuji Nagata Ana Negri Federico Gago Rebecca C Wade Jirí Damborský

Haloalkane dehalogenases are microbial enzymes that cleave a carbon-halogen bond in halogenated compounds. The haloalkane dehalogenase LinB, isolated from Sphingomonas paucimobilis UT26, is a broad-specificity enzyme. Fifty-five halogenated aliphatic and cyclic hydrocarbons were tested for dehalogenation with the LinB enzyme. The compounds for testing were systematically selected using a statis...

پایان نامه :وزارت علوم، تحقیقات و فناوری - دانشگاه زنجان - دانشکده علوم ریاضی 1391

فرض کنیمg یک گروه غیر آبلی متناهی باشد . گراف جابجایی g که با نماد نمایش داده می شود ،گرافی است ساده با مجموعه رئوس که در آن دو راس با یک یال به هم وصل می شوند اگر و تنها اگر . مکمل گراف جابجایی g راگراف نا جابجایی g می نامیم.و با نماد نشان می دهیم. گرافهای جابجایی و ناجابجایی یک گروه متناهی ،اولین بار توسطاردوش1 مطرح گردید ،ولی در سالهای اخیر به طور مفصل در مورد بحث و بررسی قرار گرفتند . در ،م...

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