نتایج جستجو برای: polyalanine

تعداد نتایج: 385  

Journal: :Chemical communications 2014
Andrew R Johnson Jonathan M Dilger Matthew S Glover David E Clemmer Erin E Carlson

A polyalanine-based peptide which forms a stable, negatively-charged α-helix in the gas phase is reported. Addition of an N-terminal acidic residue forms a stabilizing hydrogen bond network and an electrostatic interaction with the helical dipole. Formation of this secondary structure was demonstrated using ion mobility-mass spectrometry and molecular modelling techniques.

Journal: :Mutagenesis 2016
Akio Shibata Junichiro Machida Seishi Yamaguchi Masashi Kimura Tadashi Tatematsu Hitoshi Miyachi Masaki Matsushita Hiroshi Kitoh Naoki Ishiguro Atsuo Nakayama Yujiro Higashi Kazuo Shimozato Yoshihito Tokita

Cleidocranial dysplasia (CCD; MIM 119600) is an autosomal dominant skeletal dysplasia characterised by hypopalstic and/or aplastic clavicles, midface hypoplasia, absent or delayed closure of cranial sutures, moderately short stature, delayed eruption of permanent dentition and supernumerary teeth. The molecular pathogenesis can be explained in about two-thirds of CCD patients by haploinsufficie...

2012
Shyam Kishor

Ab inilio band structure results of [3-pleated polyglycine, polyalanine, and polyserine obtained using minimal basis set have been used as input to calculate the electronic density of states of different periodic and aperiodic model protein chains on the basis of negative factor counting method in tight binding approximation. The effects of the change of the basis set (double-zeta) and the seco...

2002
Alan Grossfield Jay W. Ponder

A new potential smoothing method, the shifted-tophat (or stophat) is presented. This method uses a tophat function as the smoothing kernel, instead of the gaussian used in conventional methods. Stophat smoothing is applied, as part of the Potential Smoothing and Search (PSS) procedure for global optimization, to several biomolecular problems, including polyalanine helices, united-atom and all-a...

Journal: :Biophysical journal 2002
Yong Peng Ulrich H E Hansmann

Helix-coil transitions in polyalanine molecules of length 10 are studied by multi-canonical Monte Carlo simulations. The solvation effects are included by either a distance-dependent dielectric permittivity or by a term that is proportional to the solvent-accessible surface area of the peptide. We found a strong dependence of the characteristics of the helix-coil transition from the details of ...

Journal: :Proceedings of the National Academy of Sciences of the United States of America 1997
F R Goodman S Mundlos Y Muragaki D Donnai M L Giovannucci-Uzielli E Lapi F Majewski J McGaughran C McKeown W Reardon J Upton R M Winter B R Olsen P J Scambler

Synpolydactyly (SPD) is a dominantly inherited congenital limb malformation. Typical cases have 3/4 finger and 4/5 toe syndactyly, with a duplicated digit in the syndactylous web, but incomplete penetrance and variable expressivity are common. The condition has recently been shown to be caused by expansions of an imperfect trinucleotide repeat sequence encoding a 15-residue polyalanine tract in...

Journal: :Human molecular genetics 2004
Maria T Berciano Nuria T Villagra Jose L Ojeda Joaquin Navascues Anita Gomes Miguel Lafarga Maria Carmo-Fonseca

Intranuclear inclusions composed of tubular filaments constitute a pathological hallmark of oculopharyngeal muscular dystrophy (OPMD). Autosomal dominant OPMD is caused by (GCG) repeat expansions in the gene that encodes for poly(A) binding protein nuclear 1 (PABPN1). The mutation results in the expansion of a polyalanine stretch in the N-terminus of the protein. It has been proposed that mutat...

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