نتایج جستجو برای: rna inverse folding
تعداد نتایج: 366102 فیلتر نتایج به سال:
Real-time nuclear magnetic resonance spectroscopy in the study of biomolecular kinetics and dynamics
Abstract. The review describes the application of nuclear magnetic resonance (NMR) spectroscopy to study kinetics folding, refolding and aggregation proteins, RNA DNA. Time-resolved NMR experiments can be conducted in a reversible or an irreversible manner. In particular, folding pose large requirements for (i) signal-to-noise due time limitations (ii) synchronising steps. Thus, this contributi...
The secondary structure of RNA is necessary for its maturation, regulation, processing, and function. However, the global influence of RNA folding in eukaryotes is still unclear. Here, we use a high-throughput, sequencing-based, structure-mapping approach to identify the paired (double-stranded RNA [dsRNA]) and unpaired (single-stranded RNA [ssRNA]) components of the Drosophila melanogaster and...
Earlier a three-dimensional model for a new unusual DNA conformation referred to as Slipped Loop Structure (SLS) has been suggested by us (1). The same type of folding could occur with RNA as well which means that one must use the A-form of the double helix rather than the B-one. The present paper discusses the creation of an all-atom stereochemically sound model for SLS-RNA. This calculated mo...
The Vienna RNA Websuite is a comprehensive collection of tools for folding, design and analysis of RNA sequences. It provides a web interface to the most commonly used programs of the Vienna RNA package. Among them, we find folding of single and aligned sequences, prediction of RNA-RNA interactions, and design of sequences with a given structure. Additionally, we provide analysis of folding lan...
RNA folding pathways are proving to be quite important in the determination of RNA function. Studies indicate that RNA may enter intermediate and multiple conformational states that are key to its functionality. These states may have a significant impact on gene expression and molecular function. It is known that the biologically functional states of RNA molecules may not correspond to their mi...
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