The problem of the intramolecular proton transfer isomerism in arginine, leading to conventional neutral and zwitterionic forms of this compound, is addressed by high level theoretical models. It is shown that arginine has two neutral and two zwitterionic isomers implying that there exist two additional unconventional isomers, which have not been identified so far. It appears also that the most...

The product ion spectra of proline-containing peptides are commonly dominated by yn ions generated by cleavage at the N-terminal side of proline residues. This proline effect is investigated in the current work by collision-induced dissociation (CID) of protonated Ala-AlaXxx-Pro-Ala (Xxx includes Ala, Ser, Leu, Val, Phe, and Trp) in an electrospray/quadrupole/timeof-flight (QqTOF) mass spectrom...

Quantum-chemical computations were used to investigate the structure-antioxidant parameter relationships of α-lipoic acid and its natural metabolites bisnorlipoic acid and tetranorlipoic acid in their oxidized and reduced forms. The enantiomers of lipoic and dihydrolipoic acid were optimized using the B3LYP/6-311+G(3df,2p), B3LYP/aug-cc-pVDZ and MP2(full)/6-31+G(d,p) levels of theory as isolate...

This research documents the multiplicity of L-aspartate transport in thin wastewater biofilms. A Line-weaver-Burk analysis of incorporation produced a curvilinear plot (concave down) that suggested active transport by two distinct systems (1 and 2). The inactivation of system 2 with AsO4 or osmotic shock resolved system 1, which was a high-affinity, low-capacity system with an apparent Kt (Mich...

This paper presents a new algorithm for linear text segmentation. It is an adaptation of Affinity Propagation, a state-of-the-art clustering algorithm in the framework of factor graphs. Affinity Propagation for Segmentation, or APS, receives a set of pairwise similarities between data points and produces segment boundaries and segment centres – data points which best describe all other data poi...

Zinc (Zn2+) inhibition of N-methyl-D-aspartate receptor (NMDAR) activity involves both voltage-independent and voltage-dependent components. Recombinant NR1/NR2A and NR1/NR2B receptors exhibit similar voltage-dependent block, but voltage-independent Zn2+ inhibition occurs with much higher affinity for NR1/NR2A than NR1/NR2B receptors (nanomolar versus micromolar IC50, respectively). Here, we sh...

At least two different classes of ADP binding sites on chloroplast coupling factor are de­ scribed in the literature. High-affinity sites are assumed to entail regulatory functions while low-affinity sites are involved in catalysis. Diphenyl ether herbicides, acting as energy transfer inhibitors, interfere with nucleotide ex­ change on both categories of ADP binding sites. Their inhibitory pote...

Proton nuclear magnetic resonance spectroscopy was used to determine relative binding constants for several arsenical-antidote adducts. It was found that BAL (2,3-dimercaptopropanol) and DMPS (2,3-dimercaptopropanesulfonic acid) had a higher affinity than DMSA (2,3-dimercaptosuccinic acid) for the two organic arsenicals studied.