Euclidean distance is commonly involved in calculating functional diversity (FD), for example, in measures based on dendrogram branch lengths. We point out that this function is inappropriate in many cases and that the choice of clustering method is more crucial than earlier thought. Gower’s formula and UPGMA clustering are suggested here as a standard combination of techniques for calculating ...

Bermudagrass [Cynodon dactylon (L.) Pers.], an important turfgrass used in public parks, home lawns, golf courses and sports fields, is widely distributed in China. In the present study, sequence-related amplified polymorphism (SRAP) markers were used to assess genetic diversity and population structure among 157 indigenous bermudagrass genotypes from 20 provinces in China. The application of 2...

Allelic patterns and genetic distances were examined in a collection of 103 foreign and Brazilian mango (Mangifera indica) accessions in order to develop a reference database to support cultivar protection and breeding programs. An UPGMA dendrogram was generated using Jaccard's coefficients from a distance matrix based on 50 alleles of 12 microsatellite loci. The base pair number was estimated ...

Seven STMS primers were used to analyse 20 individuals each of 15 populations of North-western Indian Himalayan hull-less barley landraces. A total of 96 alleles were detected of which 40 were common and 56 were rare. Administrative regionwise, highest allelic richness was revealed by populations from Himachal Pradesh (10.71 alleles/locus) followed by Jammu & Kashmir (8.86 alleles/locus) and Ut...

Amplified fragment length polymorphism (AFLP) markers allow a rapid assessment of the level of genetic variation that would be difficult to evaluate using a limited number of morphological markers. AFLP was used to assess the level of genetic variation among 16 different Phalaenopsis species and hybrids. Ten AFLP primer combinations were used for genetic analysis of these Phalaenopsis and 95% o...

Two major religious groups of India were studied, viz. Hindu and Muslim. The survey was confined to 1059 individuals of Aligarh city (UP). Households were selected on random a priori basis during day time by door to door contact. Muslims populations were Syed, Sheikh, Pathan, Ansari and Hindus were Brahmin, Bania, Rajput, Jatav. Gene frequency, allele frequency, heterozygosity, genetic identity...

Geographical indicator (GI) of crops create a positive impression of the product quality, the environmental virtue and human skill of the area. In the present study, comparative analysis of total seed proteins of Kasuri methi (GI of Kasur, Pakistan) was evaluated with other Trigonella genotypes by SDS-PAGE. Results showed that at protein level Kasuri methi acquired a unique status as a G.I of K...

RAPD was used to delineate the hilsa populations sampled from the Ganga, Yamuna, Hooghly, and Narmada Rivers at six different locations. Six degenerate primers were used to generate the fragment patterns from the samples collected. All primers were highly polymorphic and generated high numbers of amplification products. Nei's genetic distances were calculated between locations. The overall aver...

In the present study six different populations of L. orbonalis were collected and subjected to analysis of genetic variability in terms of carboxylesterase isozyme pattern and DNA polymorphism using RAPD-PCR. Pattern of carboxylesterase revealed a similar isozyme cluster in the populations namely, sivaganga (population-3), dindigal (population-4), virudhunagar (population-5) and coimbatore (pop...

Spinach (Spinacia oleracea L.) is an economically important leafy vegetable crop in many countries. This is the first case study of using SRAP markers to analyze genetic diversity of Iranian spinach accessions. Eight SRAP primer combinations generated 88 scorable bands ranging from 50 to 1000 bp, among which 73 were polymorphic, with an average of 82.9 polymorphic bands per primer combination a...