Background Oocyte maturity includes nuclear and cytoplasmic maturity, both of which are important for embryo fertilization. The development of oocyte is not limited to the period of follicular growth, and starts from the embryonic period and continues throughout life. In this study, for the purpose of evaluating the effect of the FSH hormone on the expression of genes, GEO access codes for this...

Background: Mammalian preimplantation development is a complex process involving dramatic changes in the transcriptional architecture. However, it is still unclear about the crucial transcriptional network and key hub genes that regulate the proceeding of preimplantation embryos. Materials and Methods: Through single-cell RNAsequencing (RNA-seq) of both human and mouse preimplantation embryos, ...

Inferring genetic networks is of great importance in unlocking gene behaviour, which in turn provides solutions for drug testing, disease resistance, and many other applications. Dynamic network models provide room for handling noisy or missing prelearned data. This paper discusses how Dynamic Bayesian Networks compare against coexpression networks as discussed by Zhang and Horvath [1]. These s...

there are two different co-expression systems including bicistronic; dual-vector or two-promoter to express two different genes simultaneously and also to study protein-protein interactions. bicistronic system has disadvantages e.g. compared with two-promoter system. in this paper, a simple method based on spliced overlap extension by polymerase chain reaction (soe-pcr) technique was demonstrat...

Gene co-expression network analysis has been shown effective in identifying functional co-expressed gene modules associated with complex human diseases. However, existing techniques to construct co-expression networks require some critical prior information such as predefined number of clusters, numerical thresholds for defining co-expression/interaction, or do not naturally reproduce the hallm...

Understanding context-specific behavior of biological systems plays a fundamental role toward analyzing molecular mechanisms contributing to genetic diseases and the development of efficient therapeutic strategies [1]. The majority of genes show significant differences in expression levels in different tissues that reflect variations in biological pathways characteristic for a particular tissue...