نتایج جستجو برای: est sequences analysis

تعداد نتایج: 2995353  

2013
Laura L. Valdez-Velázquez Verónica Quintero-Hernández Maria Teresa Romero-Gutiérrez Fredy I. V. Coronas Lourival D. Possani

Centruroides tecomanus is a Mexican scorpion endemic of the State of Colima, that causes human fatalities. This communication describes a proteome analysis obtained from milked venom and a transcriptome analysis from a cDNA library constructed from two pairs of venom glands of this scorpion. High perfomance liquid chromatography separation of soluble venom produced 80 fractions, from which at l...

2012
Jagajjit Sahu Priyabrata Sen Manabendra Dutta Choudhury Madhumita Barooah Mahendra Kumar Modi Anupam Das Talukdar

Microsatellites are the markers of choice due to their high abundance reproducibility, degree of polymorphism and co-dominant nature. These are mainly used for studying the genetic variability in different species and Marker assisted selection. Expressed Sequence Tags (ESTs) serve as the main resource for Simple Sequence Repeats (SSRs). The computational approach for detecting SSRs and developi...

Journal: :Genome 2006
Earl Taliercio Randy D Allen Margaret Essenberg Natalya Klueva Henry Nguyen Mohini A Patil Paxton Payton Ana Cecilia M Millena Angela L Phillips Margaret L Pierce Brian Scheffler Rickie Turley Jing Wang Deshui Zhang Jodi Scheffler

In an effort to expand the Gossypium hirsutum L. (cotton) expressed sequence tag (EST) database, ESTs representing a variety of tissues and treatments were sequenced. Assembly of these sequences with ESTs already in the EST database (dbEST, GenBank) identified 9675 cotton sequences not present in GenBank. Statistical analysis of a subset of these ESTs identified genes likely differentially expr...

Journal: :Physiological genomics 2006
Wilfrid Carre Xiaofei Wang Tom E Porter Yves Nys Jianshan Tang Erin Bernberg Robin Morgan Joan Burnside Samuel E Aggrey Jean Simon Larry A Cogburn

Its accessibility, unique evolutionary position, and recently assembled genome sequence have advanced the chicken to the forefront of comparative genomics and developmental biology research as a model organism. Several chicken expressed sequence tag (EST) projects have placed the chicken in 10th place for accrued ESTs among all organisms in GenBank. We have completed the single-pass 5'-end sequ...

Journal: :Journal of microbiology and biotechnology 2012
Woongsic Jung Sung Gu Lee Se Won Kang Yong Seok Lee Jun Hyuck Lee Sung-Ho Kang Eon Seon Jin Hak Jun Kim

Expressed sequence tags (ESTs) from the Antarctic green algae Pyramimonas gelidicola were analyzed to obtain molecular information on cold acclimation of psychrophilic microorganisms. A total of 2,112 EST clones were sequenced, generating 222 contigs and 219 singletons, and 200 contigs and 391 singletons from control (4 degrees C) and cold-shock conditions (-2 degrees C), respectively. The comp...

Journal: :Nucleic acids research 2004
Li Li Jonathan Crabtree Steve Fischer Deborah F. Pinney Christian J. Stoeckert L. David Sibley David S. Roos

ApiEST-DB (http://www.cbil.upenn.edu/paradbs-servlet/) provides integrated access to publicly available EST data from protozoan parasites in the phylum Apicomplexa. The database currently incorporates a total of nearly 100,000 ESTs from several parasite species of clinical and/or veterinary interest, including Eimeria tenella, Neospora caninum, Plasmodium falciparum, Sarcocystis neurona and Tox...

2010
Abdulaziz M. Al-Swailem Maher M. Shehata Faisel M. Abu-Duhier Essam J. Al-Yamani Khalid A. Al-Busadah Mohammed S. Al-Arawi Ali Y. Al-Khider Abdullah N. Al-Muhaimeed Fahad H. Al-Qahtani Manee M. Manee Badr M. Al-Shomrani Saad M. Al-Qhtani Amer S. Al-Harthi Kadir C. Akdemir Mehmet S. Inan Hasan H. Otu

Despite its economical, cultural, and biological importance, there has not been a large scale sequencing project to date for Camelus dromedarius. With the goal of sequencing complete DNA of the organism, we first established and sequenced camel EST libraries, generating 70,272 reads. Following trimming, chimera check, repeat masking, cluster and assembly, we obtained 23,602 putative gene sequen...

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