نتایج جستجو برای: upgma

تعداد نتایج: 1892  

2010
YAN-QUN LIU LI QIN YU-PING LI HUAN WANG RUN-XI XIA YONG-HONG QI XI-SHENG LI CHENG LU ZHONG-HUAI XIANG

The genetic diversity and genetic structure of three Chinese silkworm species Bombyx mori L., Antheraea pernyi Guérin-Meneville and Samia cynthia ricini Donovan were comparatively assessed based on RAPD markers. At the species level, A. pernyi and B. mori showed high levels of genetic diversity, whereas S. cynthia ricini showed low level of genetic diversity. However, at the strain level, A. pe...

2010
Rekha Baghel Renu Dhir

This paper presents a novel technique of document clustering based on frequent concepts. The proposed technique, FCDC (Frequent Concepts based document clustering), a clustering algorithm works with frequent concepts rather than frequent items used in traditional text mining techniques. Many well known clustering algorithms deal with documents as bag of words and ignore the important relationsh...

Journal: :Annals of botany 2003
Peng Nan Suhua Shi Shaolin Peng Chunjie Tian Yang Zhong

Genetic diversity was investigated in 60 individuals of Primula obconica from four natural populations (from Hubei, central China, and Sichuan, south-west China) and from cultivated material. Inter-simple sequence repeat (ISSR) techniques produced 249 polymorphic bands and identified 60 ISSR genotypes. Based on Shannon's index and Nei's genetic diversity, the genetic diversity detected in all n...

2014
Evelyze Pinheiro dos Reis Tânia Maria Fernandes Salomão Lucio Antonio de Oliveira Campos Mara Garcia Tavares

The genetic diversity and structure of the ant Atta robusta were assessed by ISSR (inter-simple sequence repeats) in 72 colonies collected from 10 localities in the Brazilian states of Espírito Santo (48 colonies) and Rio de Janeiro (24 colonies). The ISSR pattern included 67 bands, 51 of them (76.1%) polymorphic. Analysis of molecular variance (AMOVA) revealed a high level (57.4%) of inter-pop...

Journal: :Genome 2005
N A Barkley M L Newman M L Wang M W Hotchkiss G A Pederson

Polymorphic expressed sequence tag - simple sequence repeat (EST-SSR) markers derived from major cereal crops were used to assess the genetic diversity of the USDA temperate bamboo collection consisting of 92 accessions classified in 11 separate genera and 44 species. A total of 211 bands were detected with a mean number of alleles per locus of 8.440. Phylogenetic relationships were determined ...

2007
W. J.

not ensure that their joint solutions do not interact. This is clearly an undesirable property that is not shared by methods that form groups based only on the spatial relationships of OTUs that are relatively close together. Classifications based on minimum spanning trees (e.g., by using the single-link clustering method) and the UPGMA clustering method are obvious examples of methods that do ...

2014
S. Naz K. Shahzadi S. Rashid F. Saleem

Genetic relationship among 17 citrus commercially important cultivars, including local and some hybrid varieties of Pakistan was evaluated by RAPD (Random Amplified Polymorphic DNA) markers. Fifteen decamer primers were selected out of 25 primers that produced 153 polymorphic bands with 13bands per primer on an average with a total of 188 bands. To analyze the genetic similarity or dissimilarit...

2012
M. Sohrabi M. Y. Rafii M. M. Hanafi A. Siti Nor Akmar M. A. Latif

Genetic diversity is prerequisite for any crop improvement program as it helps in the development of superior recombinants. Fifty Malaysian upland rice accessions were evaluated for 12 growth traits, yield and yield components. All of the traits were significant and highly significant among the accessions. The higher magnitudes of genotypic and phenotypic coefficients of variation were recorded...

2011
M. S. I. Sagar M. B. Meah M. M. Rahman A. K. Ghose

Some Trichoderma isolates were collected from different locations of Bangladesh for evaluating their bioefficiency by determining their genetic variations. PCR-based Random Amplified Polymorphic DNA (RAPD) Marker employing 3 decamer primers produced 29 scorable bands of which all (100%) were polymorphic. The co-efficient of gene differentiation (Gst) was 1.0000 reflecting the existence of high ...

2010
A. Subramanian N. Subbaraman

An experiment was conducted to analyze the genetic diversity among 38 maize germplasm accessions of the maize germplasm bank of Department of Millets, TNAU, Coimbatore. Observations regarding 25 morphological traits were recorded and the data matrix was used for estimation of Euclidian distance by Un-weighted Paired Group Arithmetic Average (UPGMA) method. Clustering was done by Sequential Aggl...

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