OBJECTIVE The bacterium Oceanimonas sp. (O. sp.) GK1 is a member of the Aeromonadaceae family and its genome represents several virulence genes involved in fish and human pathogenicity. In this original research study we aimed to identify and characterize the putative virulence factors and pathogenicity of this halotolerant marine bacterium using genome wide analysis. MATERIALS AND METHODS Th...

Growth characteristics of a cellulolytic nitrogen-fixing bacterium isolated from a marine shipworm by Waterbury et al. (J. B. Waterbury, C. B. Calloway, and R. D. Turner, Science 221:1401-1403, 1983) are described. When grown microaerobically, the bacterium exhibited doubling times of about 2 days in cellulose-supplemented synthetic medium devoid of combined nitrogen. Maximum growth was reached...

In this paper, for the first time, an on-chip optofluidic imaging system is innovated to measure the biophysical signature of single waterborne bacterium, including both the refractive index and morphology (size and shape), based on immersion refractometry. The key features of the proposed optofluidic imaging platform include (1) multiple sites for single bacterium trapping, which enable parall...

A bacterium capable of degrading microcystins-RR, -YR, and -LR was isolated from a hypertrophic lake. The bacterium, designated Y2 and classified phenotypically as a member of the genus Sphingomonas, was shown to be distinct phylogenetically from any established species of Sphingomonas on the basis of 16S rDNA sequencing. The bacterium was tentatively identified as Sphingomonas by manual chemot...

The pH of the water associated with toxic blooms of cyanobacteria is typically in the alkaline range; however, previously only microcystin-degrading bacteria growing in neutral pH conditions have been isolated. Therefore, we sought to isolate and characterize an alkali-tolerant microcystin-degrading bacterium from a water bloom using microcystin-LR. Analysis of the 16S rRNA gene sequence reveal...

Helicobacter pylori (H. pylori) was first observed over 100 years ago yet its association with clinical diseases was not fully understanding until 1982 when Marshall and Warren identified and subsequently cultured the gastric bacterium. At their first attempt to culture the bacteria was not successful. Colonies finally grew when they accidentally left some culture plates over the Easter holiday...

INTRODUCTION Xylella fastidiosa (Xf) is a Gram-negative xylem-limited bacterium that causes Pierce’s disease (PD), plum leaf scald, almond leaf scorch, phony peach disease and many other diseases. For many plant species there is no resistant germplasm. Xylem vessels may be filled with exopolysaccharides produced by the bacterium, and pectins, gums and tyloses produced by the plant. There has be...

Fifteen strains of an anaerobic, catalase-negative, gram-positive diphtheroid-shaped bacterium recovered from human sources were characterized by phenotypic and molecular chemical and molecular genetic methods. The unidentified bacterium showed some resemblance to Actinomyces species and related taxa, but biochemical testing, polyacrylamide gel electrophoresis analysis of whole-cell proteins, a...

Simkania negevensis is an obligate intracellular bacterium grouped into the order Chlamydiales. This new amoeba-resistant intracellular bacterium might represent a novel etiologic agent of bronchiolitis and community-acquired pneumonia and occurs in aquatic habitats such as drinking water and reclaimed wastewater. Another amoeba-related bacterium, Legionella pneumophila, is an etiologic agent o...

The mechanism of some characteristics about swimming motion of the marine bacterium, Vibrio alginolyticus, close to a boundary was investigated. The motion of the microorganism that possesses single polar-flagellum propelling the cell body was dealt with as an outer flow problem from a bio-fluid dynamics viewpoint. Numerical analyses based on the boundary element method in addition to the resis...