A basic analysis toolkit for biological sequences
نویسندگان
چکیده
منابع مشابه
A Basic Language Technology Toolkit for Quechua
Thesis written by Annette Rios under the supervision of Prof. Dr. Martin Volk at the University of Zurich. The thesis defense was held at the University of Zurich on September 21, 2015 and was awarded ‘Summa Cum Laude’. The members of the committee were Prof. Dr. Martin Volk (University of Zurich, Institute of Computational Linguistics), Prof. Dr. Balthasar Bickel (University of Zurich, Departm...
متن کاملAnalysis of Information Content for Biological Sequences
Decomposing a biological sequence into modular domains is a basic prerequisite to identify functional units in biological molecules. The commonly used segmentation procedures usually have two steps. First, collect and align a set of sequences that are homologous to the target sequence. Then, parse this multiple alignment into several blocks and identify the functionally important ones by using ...
متن کاملA Scalable Systolic Multiprocessor System for Analysis of Biological Sequences
The design and implementation of an application-specific, faulttolerant, and scalable multiprocessor system called BioSCAN (Biological Sequence Comparative Analysis Node) are described. Discussed are system partitioning and integration, functional decomposition between hardware and software, the algorithm and its implementation in VLSI, the early results of using the system, and comparison with...
متن کاملBiospectrogram: a tool for spectral analysis of biological sequences
Summary: Biospectrogam is an open-source software for the spectral analysis of DNA and protein sequences. The software can fetch (from NCBI server), import and manage biological data. One can analyze the data using Digital Signal Processing (DSP) techniques since the software allows the user to convert the symbolic data into numerical data using 23 popular encodings and then apply popular trans...
متن کاملSirius PSB: a Generic System for Analysis of Biological Sequences
Computational tools are essential components of modern biological research. For example, BLAST searches can be used to identify related proteins based on sequence homology, or when a new genome is sequenced, prediction models can be used to annotate functional sites such as transcription start sites, translation initiation sites and polyadenylation sites and to predict protein localization. Her...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Algorithms for Molecular Biology
سال: 2007
ISSN: 1748-7188
DOI: 10.1186/1748-7188-2-10