A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki
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چکیده
منابع مشابه
A community-curated consensual annotation that is continuously updated: the Bacillus subtilis centred wiki SubtiWiki
Bacillus subtilis is the model organism for Gram-positive bacteria, with a large amount of publications on all aspects of its biology. To facilitate genome annotation and the collection of comprehensive information on B. subtilis, we created SubtiWiki as a community-oriented annotation tool for information retrieval and continuous maintenance. The wiki is focused on the needs and requirements o...
متن کاملSubtiWiki—a comprehensive community resource for the model organism Bacillus subtilis
In the post-genomic era, most components of a cell are known and they can be quantified by large-scale functional genomics approaches. However, genome annotation is the bottleneck that hampers our understanding of living cells and organisms. Up-to-date functional annotation is of special importance for model organisms that provide a frame of reference for studies with other relevant organisms. ...
متن کاملSubtiWiki–a database for the model organism Bacillus subtilis that links pathway, interaction and expression information
Genome annotation and access to information from large-scale experimental approaches at the genome level are essential to improve our understanding of living cells and organisms. This is even more the case for model organisms that are the basis to study pathogens and technologically important species. We have generated SubtiWiki, a database for the Gram-positive model bacterium Bacillus subtili...
متن کاملSubtiWiki in 2018: from genes and proteins to functional network annotation of the model organism Bacillus subtilis
Living cells are made up of individual parts, i.e. the genome, the proteins, the RNA and lipid molecules as well as the metabolites and ions. However, life depends on the functional interaction among these components which is often organized in networks. Here, we present the recent development of SubtiWiki, the integrated database for the model bacterium Bacillus subtilis (http://subtiwiki. uni...
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The Open Regulatory Annotation database (ORegAnno) is a resource for curated regulatory annotation. It contains information about regulatory regions, transcription factor binding sites, RNA binding sites, regulatory variants, haplotypes, and other regulatory elements. ORegAnno differentiates itself from other regulatory resources by facilitating crowd-sourced interpretation and annotation of re...
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ژورنال
عنوان ژورنال: Database
سال: 2009
ISSN: 1758-0463
DOI: 10.1093/database/bap012