Classification epitopes in groups based on their protein family
نویسندگان
چکیده
منابع مشابه
Protein family classification based on searching a database of blocks.
The most highly conserved regions of proteins can be represented as "blocks" of locally aligned sequence segments. Previously, an automated system was introduced to generate a database of blocks that is searched for local similarities using a sequence query. Here, we describe a method for searching this database that can also reveal significant global similarities. Local and global alignments a...
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A Structure-Based Classification and Analysis of Protein Domain Family Binding Sites and Their Interactions
While the number of solved 3D protein structures continues to grow rapidly, the structural rules that distinguish protein-protein interactions between different structural families are still not clear. Here, we classify and analyse the secondary structural features and promiscuity of a comprehensive non-redundant set of domain family binding sites (DFBSs) and hetero domain-domain interactions (...
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Similarity concept, finding the resemblance or classifying some groups of objects and study their common properties has been the interest of many researchers. Basically, in the studies the similarity between two objects or phenomena, 2-similarity in our words, has been discussed. In this paper, we consider the case when the resemblance or similarity among three objects or phenomena of a set, 3-...
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In species with long life cycles and discontinuous availability of individuals to reproduction, implementing a long-term captive breeding program can be difficult or impossible. In such cases, managing diversity among familiar groups instead of individuals could become a suitable approach to avoid inbreeding and increase the possibility to accomplish a breeding scheme. This is the case of sever...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2015
ISSN: 1471-2105
DOI: 10.1186/1471-2105-16-s19-s7