Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign
نویسندگان
چکیده
منابع مشابه
PARTS: Probabilistic Alignment for RNA joinT Secondary structure prediction
A novel method is presented for joint prediction of alignment and common secondary structures of two RNA sequences. The joint consideration of common secondary structures and alignment is accomplished by structural alignment over a search space defined by the newly introduced motif called matched helical regions. The matched helical region formulation generalizes previously employed constraints...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2007
ISSN: 1471-2105
DOI: 10.1186/1471-2105-8-130