Estimating bayesian networks parameters using EM and Gibbs sampling

Bayesian inference of genetic parameters for reproductive traits in Sistani native cows using Gibbs sampling

This study was undertaken to estimate the genetic parameters for some reproduction traits in Sistani beef cattle. The data set consisted of 1489 records of number of insemination, calving, and insemination dates in different calving was used. Reproduction traits including calving interval (CI), gestation length (GL), days open (DO), calving to first service (CTFS), first service to conception (...

Estimating Markov Switching model using Gibbs sampling

The objective of this paper is to provide readers with the program to estimate a Markov switching model with time varying transition probability(Filardo, 1994) by using a statistical computing software R. Although many of the previous studies estimating the model have conducted the estimation by the maximum likelihood estimation, this paper utilizes Gibbs sampling method. Using Gibbs sampling m...

Bayesian Estimates of Genetic Relationships between Growth Curve Parameters in Shall Sheep via Gibbs Sampling

The objective of this study was to estimate variance components and genetic parameters for growth curve parameters in Shall sheep. Studied traits were parameters of Brody growth model which included A (asymptotic mature weight), B (initial animal weight) and K (maturation rate). The data set and pedigree information used in this study were obtained from the Animal Breeding Center of Iran and co...

Regulatory Motifs, Gibbs Sampling, and EM

Bayesian Inference of (Co) Variance Components and Genetic Parameters for Economic Traits in Iranian Holsteins via Gibbs Sampling

The aim of this study was using Bayesian approach via Gibbs sampling (GS) for estimating genetic parameters of production, reproduction and health traits in Iranian Holstein cows. Data consisted of 320666 first- lactation records of Holstein cows from 7696 sires and 260302 dams collected by the animal breeding center of Iran from year 1991 to 2010. (Co) variance components were estimated using ...