Finding maximal leaf-agreement isomorphic descendent subtrees from phylogenetic trees with different species
نویسندگان
چکیده
منابع مشابه
Efficient Algorithms for Descendent Subtrees Comparison of Phylogenetic Trees with Applications to Co-evolutionary Classifications in Bacterial Genome
A phylogenetic tree is a rooted tree with unbounded degree such that each leaf node is uniquely labelled from 1 to n. The descendent subtree of of a phylogenetic tree T is the subtree composed by all edges and nodes of T descending from a vertex. Given a set of phylogenetic trees, we present linear time algorithms for finding all leaf-agree descendent subtrees as well as all isomorphic descende...
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Bayesian inference of phylogeny is unique among phylogenetic reconstruction methods in that it produces a posterior distribution of trees rather than a point estimate of the best tree. The most common way to summarize this distribution is to report the majority-rule consensus tree annotated with the marginal posterior probabilities of each partition. Reporting a single tree discards information...
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Let T be a weighted tree. The weight of a subtree T1 of T is defined as the product of weights of vertices and edges of T1. We obtain a linear-time algorithm to count the sum of weights of subtrees of T . As applications, we characterize the tree with the diameter at least d, which has the maximum number of subtrees, and we characterize the tree with the maximum degree at least ∆, which has the...
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ژورنال
عنوان ژورنال: Theoretical Computer Science
سال: 2007
ISSN: 0304-3975
DOI: 10.1016/j.tcs.2006.10.028