GCA: an R package for genetic connectedness analysis using pedigree and genomic data

The kinship2 R package for pedigree data.

BACKGROUND The kinship2 package is restructured from the previous kinship package. Existing features are now enhanced and new features added for handling pedigree objects. METHODS Pedigree plotting features have been updated to display features on complex pedigrees while adhering to pedigree plotting standards. Kinship matrices can now be calculated for the X chromosome. Other methods have be...

An Integrated Genetic Analysis Package Using R

Meta-Analysis in R Using Package rmeta

Meta-Analysis means a statistical analysis on the results of their findings is to combine a large number of independent studies. Meta-Analysis software is needed to be done for convenience, Statistical Software for Meta-Analysis is available in many statistical packages available in the present study provide software R is for Meta-Analysis. First, a brief description of the Meta-Analysis, Stati...

iGenomicViewer: R package for visualisation of high dimension genomic data

While the technologies for high dimensional data have been advancing, a lack of adequate visualisation tools to accommodate the results and inability to integrate multiple sources of data has emerged. The move towards multi-disciplinary work and collaborative research impresses the need for visualisation and analysis tools that are platform independent and customisable. iGenomicViewer through t...

GeoXp: An R Package for Exploratory Spatial Data Analysis

We present GeoXp, an R package implementing interactive graphics for exploratory spatial data analysis. We use data bases coming from the spdep package to illustrate the use of these exploratory techniques based on the coupling between a statistical graph and a map. Besides elementary plots like boxplots, histograms or simple scatterplots, GeoXp also couples maps with Moran scatterplots, variog...