HPG pore: an efficient and scalable framework for nanopore sequencing data
نویسندگان
چکیده
منابع مشابه
poRe: an R package for the visualization and analysis of nanopore sequencing data
MOTIVATION The Oxford Nanopore MinION device represents a unique sequencing technology. As a mobile sequencing device powered by the USB port of a laptop, the MinION has huge potential applications. To enable these applications, the bioinformatics community will need to design and build a suite of tools specifically for MinION data. RESULTS Here we present poRe, a package for R that enables u...
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Wiener filter suppresses noise efficiently. However, it makes the out image blurred. Curvelet preserves the edges of natural images perfectly, but, it produces visual distortion artifacts and fuzzy edges to the restored image, especially in homogeneous regions of images. In this paper, a new image denoising framework based on Curvelet transform and wiener filter is proposed, which can stop nois...
متن کاملNanocall: an open source basecaller for Oxford Nanopore sequencing data
MOTIVATION The highly portable Oxford Nanopore MinION sequencer has enabled new applications of genome sequencing directly in the field. However, the MinION currently relies on a cloud computing platform, Metrichor (metrichor.com), for translating locally generated sequencing data into basecalls. RESULTS To allow offline and private analysis of MinION data, we created Nanocall. Nanocall is th...
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ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2016
ISSN: 1471-2105
DOI: 10.1186/s12859-016-0966-0