Non-coding RNA annotation of the genome of Trichoplax adhaerens

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Non-coding RNA annotation of the genome of Trichoplax adhaerens

A detailed annotation of non-protein coding RNAs is typically missing in initial releases of newly sequenced genomes. Here we report on a comprehensive ncRNA annotation of the genome of Trichoplax adhaerens, the presumably most basal metazoan whose genome has been published to-date. Since blast identified only a small fraction of the best-conserved ncRNAs--in particular rRNAs, tRNAs and some sn...

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Mitochondrial genome of Trichoplax adhaerens supports placozoa as the basal lower metazoan phylum.

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Eukaryotic genome sequencing projects often yield bacterial DNA sequences, data typically considered as microbial contamination. However, these sequences may also indicate either symbiont genes or lateral gene transfer (LGT) to host genomes. These bacterial sequences can provide clues about eukaryote-microbe interactions. Here, we used the genome of the primitive animal Trichoplax adhaerens (Me...

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ژورنال

عنوان ژورنال: Nucleic Acids Research

سال: 2009

ISSN: 0305-1048,1362-4962

DOI: 10.1093/nar/gkn1084