Re-analysis of RNA-Sequencing Data on Apple Stem Grooving Virus infected Apple reveals more significant differentially expressed genes
نویسندگان
چکیده
منابع مشابه
شناسایی مولکولی و گروه بندی جدایه های دو ویروسapple stem grooving virus و apple stem pitting virus در استان اصفهان
چکیده سیب درختی (malus domestica borkh) متعلق به خانواده rosaceae از میوه های مهم و اقتصادی مناطق معتدله و سردسیری ایران است. ویروس ساقه شیاری سیب apple stem grooving virus (asgv) عضو تیپ جنس capillovirus و ویروس ساقه آبله ای سیب apple stem pitting virus (aspv) عضو تیپ جنس foveavirus متعلق به خانوادهbetaflexiviridae ، از مهمترین ویروس های بیماری زای سیب محسوب می شوند. آلودگی این دو ویروس درس...
15 صفحه اولPhylogenetic analysis and recombination events in full genome sequences of apple stem grooving virus.
Apple stem grooving virus (ASGV) is one of the most important viral pathogens infecting pome and stone fruit trees worldwide. In this study, with the complete nucleotide sequence of isolate ASGV-T47, which we generated, molecular variation and recombination in ASGV full genomic sequences worldwide were analyzed. ASGV-T47 shared 79.7-97.6% nucleotide identity with the other isolates worldwide an...
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To understand the molecular basis of viral diseases, transcriptome profiling has been widely used to correlate host gene expression change patterns with disease symptoms during viral infection in many plant hosts. We used infection of apple by Apple stem grooving virus (ASGV), which produces no disease symptoms, to assess the significance of host gene expression changes in disease development. ...
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A citrus tatter leaf isolate (CTLV-Cl) of Apple stem grooving virus (ASGV) has been found to be associated with a fruit rind intumescence in Cleopatra mandarin (Citrus reshni) in Limeira (SP). The CTLV-Cl was mechanically transmitted to the main experimental herbaceous hosts of CTLV. Chenopodium quinoa and C. amaranticolor reacted with local lesions and systemic symptoms while other test plants...
متن کاملRNA sequencing reveals differentially expressed genes as potential diagnostic and prognostic indicators of gallbladder carcinoma
Gallbladder carcinoma (GBC) is a rare tumor with a dismal survival rate overall. Hence, there is an urgent need for exploring more specific and sensitive biomarkers for the diagnosis and treatment of GBC. At first, amplified total RNAs from two paired GBC tumors and adjacent non-tumorous tissues (ANTTs) were subjected to RNA sequencing. 161 genes were identified differentially expressed between...
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ژورنال
عنوان ژورنال: Canadian Journal of Biotechnology
سال: 2017
ISSN: 2560-8304
DOI: 10.24870/cjb.2017-a278