SWAPSC: sliding window analysis procedure to detect selective constraints

SWAPSC: sliding window analysis procedure to detect selective constraints

UNLABELLED Sliding-window analysis procedure to detect selective constraints (SWAPSC) is a software system to dissect the constraints on the evolution of protein-coding genes. The program estimates rates of nucleotide substitutions at specific codon regions in each branch of a phylogenetic tree. The program uses several sets of simulated sequence alignments to estimate the probability of synony...

Sliding Windows Analysis Procedure to detect Selective Constraints (SWAPSC)

Analysis of Sliding Window Techniques for Exponentiation

The m-ary method for computing x E partitions the bits of the integer E into words of constant length, and then performs as many multiplications as there are nonzero words. Variable length partitioning strategies have been suggested to reduce the number of nonzero words, and thus, the total numb e r o f m ultiplications. Algorithms for exponentiation using such partitioning strategies are terme...

Correlation Based Approach with a Sliding Window Model to Detect and Mitigate Ddos Attacks

Corresponding Author: Ayyamuthukumar, D. Department of CSE, K.S. Rangasamy College of Technology, Tiruchengode, Namakkal, Tamilnadu, India Email: [email protected] Abstract: DDoS attacks have become very popular since the turn of this millennium and has stayed in the headlines due to ever increasing and sometimes devastating attacks on popular web servers. In this study, we deal with DDoS ...

RB-Finder: An Improved Distance-Based Sliding Window Method to Detect Recombination Breakpoints

Recombination detection is important before inferring phylogenetic relationships. This will eventually lead to a better understanding of pathogen evolution, more accurate genotyping, and advancements in vaccine development. In this paper, we introduce RB-Finder, a fast and accurate distance-based window method to detect recombination in a multiple sequence alignment. Our method introduces a mor...