The tissue micro-array data exchange specification: a web based experience browsing imported data
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چکیده
منابع مشابه
The tissue micro-array data exchange specification: a web based experience browsing imported data
BACKGROUND The AIDS and Cancer Specimen Resource (ACSR) is an HIV/AIDS tissue bank consortium sponsored by the National Cancer Institute (NCI) Division of Cancer Treatment and Diagnosis (DCTD). The ACSR offers to approved researchers HIV infected biologic samples and uninfected control tissues including tissue cores in micro-arrays (TMA) accompanied by de-identified clinical data. Researchers i...
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BACKGROUND Tissue Microarrays (TMAs) allow researchers to examine hundreds of small tissue samples on a single glass slide. The information held in a single TMA slide may easily involve Gigabytes of data. To benefit from TMA technology, the scientific community needs an open source TMA data exchange specification that will convey all of the data in a TMA experiment in a format that is understan...
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BACKGROUND The Association for Pathology Informatics (API) Extensible Mark-up Language (XML) TMA Data Exchange Specification (TMA DES) proposed in April 2003 provides a community-based, open source tool for sharing tissue microarray (TMA) data in a common format. Each tissue core within an array has separate data including digital images; therefore an organized, common approach to produce, navi...
متن کاملMARAN: Normalizing Micro-array Data
SUMMARY MARAN is a web-based application for normalizing microarray data. MARAN comprises a generic ANOVA model, an option for Loess fitting prior to ANOVA analysis, and a module for selecting genes with significantly changing expression. AVAILABILITY http://www.esat.kuleuven.ac.be/maran/.
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ژورنال
عنوان ژورنال: BMC Medical Informatics and Decision Making
سال: 2005
ISSN: 1472-6947
DOI: 10.1186/1472-6947-5-25