To Improve Protein Sequence Profile Prediction through Image Captioning on Pairwise Residue Distance Map

نویسندگان
چکیده

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Actor-Critic Sequence Training for Image Captioning

Generating natural language descriptions of images is an important capability for a robot or other visual-intelligence driven AI agent that may need to communicate with human users about what it is seeing. Such image captioning methods are typically trained by maximising the likelihood of ground-truth annotated caption given the image. While simple and easy to implement, this approach does not ...

متن کامل

Prediction of protein interaction sites from sequence profile and residue neighbor list.

Protein-protein interaction sites are predicted from a neural network with sequence profiles of neighboring residues and solvent exposure as input. The network was trained on 615 pairs of nonhomologous complex-forming proteins. Tested on a different set of 129 pairs of nonhomologous complex-forming proteins, 70% of the 11,004 predicted interface residues are actually located in the interfaces. ...

متن کامل

Sequence to Sequence Model for Video Captioning

Automatically generating video captions with natural language remains a challenge for both the field of nature language processing and computer vision. Recurrent Neural Networks (RNNs), which models sequence dynamics, has proved to be effective in visual interpretation. Based on a recent sequence to sequence model for video captioning, which is designed to learn the temporal structure of the se...

متن کامل

Learning to Evaluate Image Captioning

Evaluation metrics for image captioning face two challenges. Firstly, commonly used metrics such as CIDEr, METEOR, ROUGE and BLEU often do not correlate well with human judgments. Secondly, each metric has well known blind spots to pathological caption constructions, and rulebased metrics lack provisions to repair such blind spots once identified. For example, the newly proposed SPICE correlate...

متن کامل

Template-based protein–protein docking exploiting pairwise interfacial residue restraints

Although many advanced and sophisticated ab initio approaches for modeling protein-protein complexes have been proposed in past decades, template-based modeling (TBM) remains the most accurate and widely used approach, given a reliable template is available. However, there are many different ways to exploit template information in the modeling process. Here, we systematically evaluate and bench...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Journal of Chemical Information and Modeling

سال: 2019

ISSN: 1549-9596,1549-960X

DOI: 10.1021/acs.jcim.9b00438